Mercurial > repos > iuc > package_openbabel_2_3

changeset 5:22492d97b604 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_openbabel_2_3 commit 2e18fe350712147421228210013814bc0aeec120
author iuc
date Tue, 01 Mar 2016 10:42:59 -0500
parents 4ec0d9c57ddd
children
files tool_dependencies.xml
diffstat 1 files changed, 2 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Tue Dec 22 19:26:12 2015 -0500
+++ b/tool_dependencies.xml	Tue Mar 01 10:42:59 2016 -0500
@@ -6,18 +6,14 @@
     <package name="openbabel" version="2.3.2">
         <install version="1.0">
             <actions>
-                <action type="download_by_url">http://downloads.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz</action>
-
-                <!-- populate the environment variables from the dependend repos -->
+                <action sha256sum="4eaca26679aa6cc85ebf96af19191472ac63ca442c36b0427b369c3a25705188" type="download_by_url">https://depot.galaxyproject.org/software/openbabel/openbabel_2.3.2_src_all.tar.gz</action>
                 <action type="set_environment_for_install">
                     <repository changeset_revision="de8798991a6a" name="package_eigen_3_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="eigen3" version="3.1.3" />
                     </repository>
                 </action>
 
-                <!--
-                    Huge hack, to point to the actual python lib path. Cmake gets confused with mixed python versions (2.x and 3.x) and we need to point explicitely to the recent version.
-                -->
+                <!-- Huge hack, to point to the actual python lib path. Cmake gets confused with mixed python versions (2.x and 3.x) and we need to point explicitely to the recent version. -->
                 <action type="shell_command">cmake . -DPYTHON_BINDINGS=ON -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR -DEIGEN3_INCLUDE_DIR=$EIGEN3_SOURCE_PATH -DPYTHON_LIBRARY=`python -c 'import distutils.sysconfig; print "%s/libpython%s.so" % (distutils.sysconfig.get_config_var("LIBPL"), distutils.sysconfig.get_python_version())'`</action>
                 <action type="make_install" />
                 <action type="set_environment">