changeset 1:a8912a41ecc8 draft

Uploaded
author bgruening
date Wed, 30 Oct 2013 11:48:30 -0400
parents 83bd107a5300
children 3d20f97fe1b4
files tool_dependencies.xml
diffstat 1 files changed, 6 insertions(+), 7 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Fri Oct 18 03:18:33 2013 -0400
+++ b/tool_dependencies.xml	Wed Oct 30 11:48:30 2013 -0400
@@ -37,13 +37,12 @@
                 </actions>
                 <!-- This actions tag is only processed if none of the above tags resulted in a successful installation. -->
                 <actions>
-                    <action type="download_by_url">http://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz</action>
-                    <action type="shell_command">ls -l &gt; $INSTALL_DIR/foo.txt</action>
-                    <action type="shell_command">ls -l > $INSTALL_DIR/foo.txt</action>
-                   <action type="shell_command">make</action>
-
+                    <action type="download_by_url" target_filename="muscle3.8.31.tar.gz">http://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz</action>
+                    <!-- When compiling, need to remove the '-static' linker option from the src/mk file used by src/Makefile -->
+                    <action type="shell_command">sed -i 's/-static//g' src/mk</action>
+                    <action type="shell_command">make -C src/</action>
                     <action type="move_file">
-                        <source>muscle</source>
+                        <source>src/muscle</source>
                         <destination>$INSTALL_DIR</destination>
                     </action>
                 </actions>
@@ -55,7 +54,7 @@
         </install>
         <readme>
 Downloads the precompiled 32bit Linux, 64bit Linux, or Mac OS X MUSCLE
-binaries, which is faster than performing a local compliation,
+binaries, which is faster than performing a local compilation,
 avoids any issues with build dependencies, and is more reproducible between
 installations as there is no variability from the compiler or library 
 versions.