Mercurial > repos > iuc > package_macs2_2_1_0

changeset 1:fd298b5decac draft

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Uploaded
author iuc
date Wed, 18 Feb 2015 11:36:30 -0500
parents 6d85350ae428
children 823f2c6f361f
files tool_dependencies.xml
diffstat 1 files changed, 13 insertions(+), 12 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Thu Jan 08 13:32:28 2015 -0500
+++ b/tool_dependencies.xml	Wed Feb 18 11:36:30 2015 -0500
@@ -1,22 +1,23 @@
 <?xml version="1.0"?>
 <tool_dependency>
-  <package name="numpy" version="1.7.1">
-      <repository changeset_revision="84125ffacb90" name="package_numpy_1_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    <package name="numpy" version="1.7.1">
+       <repository changeset_revision="6a7842f2f960" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="scipy" version="0.12.0">
-      <repository changeset_revision="a983dc7c8103" name="package_scipy_0_12" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+       <repository changeset_revision="75bed484c53c" name="package_scipy_0_12" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <!-- 2.1.0.20140616 -->
     <package name="macs2" version="2.1.0">
-      <install version="1.0">
-          <actions>
-              <action type="download_by_url">https://pypi.python.org/packages/source/M/MACS2/MACS2-2.1.0.20140616.tar.gz</action>
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">https://pypi.python.org/packages/source/M/MACS2/MACS2-2.1.0.20140616.tar.gz</action>
+
                 <action type="set_environment_for_install">
-                  <repository changeset_revision="84125ffacb90" name="package_numpy_1_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
-                      <package name="numpy" version="1.7.1" />
+                    <repository changeset_revision="6a7842f2f960" name="package_numpy_1_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                        <package name="numpy" version="1.7.1" />
                     </repository>
-                    <repository changeset_revision="a983dc7c8103" name="package_scipy_0_12" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
-                      <package name="scipy" version="0.12.0" />
+                    <repository changeset_revision="75bed484c53c" name="package_scipy_0_12" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                        <package name="scipy" version="0.12.0" />
                     </repository>
                 </action>
                 <action type="make_directory">$INSTALL_DIR/lib/python</action>
@@ -26,13 +27,13 @@
                     python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
                 </action>
                 <action type="set_environment">
-                  <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
+                    <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
                     <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable>
                     <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable>
                     <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                     <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_SCIPY]</environment_variable>
                     <environment_variable action="set_to" name="PYTHONPATH_MACS2">$INSTALL_DIR/lib/python</environment_variable>
-                </action>
+                    </action>
             </actions>
         </install>
         <readme>Macs2 installation instructions. MACS2 can be found at https://github.com/taoliu/MACS</readme>