Mercurial > repos > iuc > package_lapack_3_4
comparison tool_dependencies.xml @ 4:ad6c1415507a draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit 4e829bc62e1328b12abf9d43112967296dcfed7a
| author | iuc |
|---|---|
| date | Thu, 16 Jun 2016 12:15:43 -0400 |
| parents | b5caa0c1be7b |
| children |
comparison
equal
deleted
inserted
replaced
| 3:b5caa0c1be7b | 4:ad6c1415507a |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <tool_dependency> | 2 <tool_dependency> |
| 3 <package name="cmake" version="3.2.3"> | 3 <package name="cmake" version="3.2.3"> |
| 4 <repository changeset_revision="2da7b99cb1a1" name="package_cmake_3_2_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> | 4 <repository changeset_revision="2da7b99cb1a1" name="package_cmake_3_2_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> |
| 5 </package> | 5 </package> |
| 6 | |
| 7 <package name="lapack" version="3.4.2"> | 6 <package name="lapack" version="3.4.2"> |
| 8 <install version="1.0"> | 7 <install version="1.0"> |
| 9 <actions> | 8 <actions> |
| 10 <action sha256sum="60a65daaf16ec315034675942618a2230521ea7adf85eea788ee54841072faf0" type="download_by_url">http://www.netlib.org/lapack/lapack-3.4.2.tgz</action> | 9 <action sha256sum="60a65daaf16ec315034675942618a2230521ea7adf85eea788ee54841072faf0" type="download_by_url">https://depot.galaxyproject.org/software/lapack/lapack_3.4.2_src_all.tar.gz</action> |
| 11 | 10 |
| 12 <action type="set_environment_for_install"> | 11 <action type="set_environment_for_install"> |
| 13 <repository changeset_revision="2da7b99cb1a1" name="package_cmake_3_2_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> | 12 <repository changeset_revision="2da7b99cb1a1" name="package_cmake_3_2_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> |
| 14 <package name="cmake" version="3.2.3" /> | 13 <package name="cmake" version="3.2.3" /> |
| 15 </repository> | 14 </repository> |
| 16 </action> | 15 </action> |
| 17 | 16 |
| 17 <!-- compile both static and shared library --> | |
| 18 <action type="shell_command"> | 18 <action type="shell_command"> |
| 19 mkdir build && | 19 mkdir build && |
| 20 cd build && | 20 cd build && |
| 21 cmake .. -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR/lapack -DCMAKE_Fortran_FLAGS='-O2 -fPIC' && | 21 cmake .. -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR/lapack -DCMAKE_Fortran_FLAGS='-O2 -fPIC' && |
| 22 | 22 make && |
| 23 make install && | |
| 24 cmake .. -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR/lapack -DBUILD_SHARED_LIBS=ON -DCMAKE_Fortran_FLAGS='-O2 -fPIC' && | |
| 23 make && | 25 make && |
| 24 make install | 26 make install |
| 25 </action> | 27 </action> |
| 26 | |
| 27 <action type="set_environment"> | 28 <action type="set_environment"> |
| 28 <environment_variable action="set_to" name="LAPACK_LIB_DIR">$INSTALL_DIR/lapack/lib</environment_variable> | 29 <environment_variable action="set_to" name="LAPACK_LIB_DIR">$INSTALL_DIR/lapack/lib</environment_variable> |
| 30 <environment_variable action="prepend_to" name="LIBRARY_PATH">$INSTALL_DIR/lapack/lib</environment_variable> | |
| 31 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lapack/lib</environment_variable> | |
| 29 </action> | 32 </action> |
| 30 </actions> | 33 </actions> |
| 31 </install> | 34 </install> |
| 32 <readme>LAPACK requires gcc, gfortran and cmake. LAPACK_LIB_DIR will be set (including liblapack.a and libblas.a). </readme> | 35 <readme>LAPACK requires gcc, gfortran and cmake. LAPACK_LIB_DIR will be set (including liblapack.a and libblas.a). </readme> |
| 33 </package> | 36 </package> |