changeset 5:d4f61afe0f16 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_fastx_toolkit_0_0_14 commit 231157132a50f5bc8f9d0c8151c4ddca86c97213-dirty
author iuc
date Thu, 15 Sep 2016 07:09:47 -0400
parents 933d0e3d9e84
children 6432b54f2553
files tool_dependencies.xml
diffstat 1 files changed, 5 insertions(+), 10 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Thu Sep 15 06:56:27 2016 -0400
+++ b/tool_dependencies.xml	Thu Sep 15 07:09:47 2016 -0400
@@ -1,23 +1,18 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="libgtextutils" version="0.6">
-        <repository changeset_revision="3f8eeecabf16" name="package_libgtextutils_0_6" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    <package name="libgtextutils" version="0.7">
+        <repository changeset_revision="c63939f1d9a6" name="package_libgtextutils_0_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="fastx_toolkit" version="0.0.14">
         <install version="1.0">
             <actions>
                 <action sha256sum="9e1f00c4c9f286be59ac0e07ddb7504f3b6433c93c5c7941d6e3208306ff5806" type="download_by_url">https://github.com/agordon/fastx_toolkit/releases/download/0.0.14/fastx_toolkit-0.0.14.tar.bz2</action>
                 <action type="set_environment_for_install">
-                    <repository changeset_revision="3f8eeecabf16" name="package_libgtextutils_0_6" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu">
-                        <package name="libgtextutils" version="0.6" />
+                    <repository changeset_revision="c63939f1d9a6" name="package_libgtextutils_0_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                        <package name="libgtextutils" version="0.7" />
                     </repository>
                 </action>
-                <action type="shell_command">
-                    export PKG_CONFIG_PATH="$LIBGTEXTUTILS_ROOT_DIR"/lib/pkgconfig/ &amp;&amp;
-                     ./configure --prefix=$INSTALL_DIR --disable-wall &amp;&amp;
-                    make &amp;&amp;
-                    make install
-                </action>
+                <action type="autoconf">--disable-wall</action>
                 <action type="set_environment">
                     <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                 </action>