changeset 5:feb1e4cb43f3 draft

Uploaded
author bgruening
date Sat, 15 Nov 2014 05:41:35 -0500
parents 32fc68e671b5
children 6b40f2744cde
files tool_dependencies.xml
diffstat 1 files changed, 2 insertions(+), 7 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Fri Nov 14 19:58:45 2014 -0500
+++ b/tool_dependencies.xml	Sat Nov 15 05:41:35 2014 -0500
@@ -18,7 +18,7 @@
                         <package name="libxml2" version="2.9.1" />
                     </repository>
                     <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_2_10/getopt_1.20.0.tar.gz</package>
-                    <package>http://bioconductor.org/packages/release/bioc/src/contrib/BiocGenerics_0.12.0.tar.gz</package>
+                    <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/BiocGenerics_0.12.1.tar.gz</package>
                     <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/Rcpp_0.11.3.tar.gz</package>
                     <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/RcppArmadillo_0.4.500.0.tar.gz</package>
                     <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/S4Vectors_0.4.0.tar.gz</package>
@@ -42,11 +42,10 @@
                     <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/dichromat_2.0-0.tar.gz</package>
                     <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/munsell_0.4.2.tar.gz</package>
                     <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/labeling_0.3.tar.gz</package>
-
                     <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/foreach_1.4.2.tar.gz</package>
                     <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/digest_0.6.4.tar.gz</package>
                     <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/BatchJobs_1.5.tar.gz</package>
-                        <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_2_10/Biobase_2.22.0.tar.gz</package>
+                    <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/Biobase_2.26.0.tar.gz</package>
                     <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/AnnotationDbi_1.28.1.tar.gz</package>
                     <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/annotate_1.44.0.tar.gz</package>
                     <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/RColorBrewer_1.0-5.tar.gz</package>
@@ -66,10 +65,6 @@
                     <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/Hmisc_3.14-5.tar.gz</package>
                     <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_6_1/DESeq2_1.6.1.tar.gz</package>
 
-
-
-
-
                 </action>
             </actions>
         </install>