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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="numpy" version="1.9">
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2
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4 <repository changeset_revision="c35b30122eb6" name="package_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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5 </package>
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6 <package name="python" version="2.7">
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8
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7 <repository changeset_revision="2083f31ea721" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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8 </package>
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9 <package name="bx-python" version="0.7.2">
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10 <install version="1.0">
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11 <actions>
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12 <action type="set_environment_for_install">
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2
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13 <repository changeset_revision="c35b30122eb6" name="package_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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14 <package name="numpy" version="1.9" />
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15 </repository>
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16 </action>
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17 <action type="setup_python_environment">
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8
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18 <repository changeset_revision="2083f31ea721" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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19 <package name="python" version="2.7" />
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20 </repository>
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21 <!-- allow downloading and installing an Python package from https://pypi.org/ -->
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3
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22 <package>https://pypi.python.org/packages/source/b/bx-python/bx-python-0.7.1.tar.gz</package>
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23 </action>
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24 <action type="set_environment">
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25 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
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26 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
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27 <environment_variable action="set_to" name="BX_PYTHON_PATH">$INSTALL_DIR</environment_variable>
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28 </action>
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29 </actions>
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30 </install>
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31 <readme>
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32 Installation of bx-python. The installation can be accessed via BX_PYTHON_PATH.
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33 </readme>
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34 </package>
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35 </tool_dependency>
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