|
0
|
1 <?xml version="1.0"?>
|
|
|
2 <tool_dependency>
|
|
1
|
3 <package name="numpy" version="1.7.1">
|
|
|
4 <repository changeset_revision="84125ffacb90" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
|
|
|
5 </package>
|
|
0
|
6 <package name="bx-python" version="0.7.1">
|
|
|
7 <install version="1.0">
|
|
|
8 <actions>
|
|
|
9 <action type="download_by_url">https://pypi.python.org/packages/source/b/bx-python/bx-python-0.7.1.tar.gz</action>
|
|
1
|
10
|
|
|
11 <action type="set_environment_for_install">
|
|
|
12 <repository changeset_revision="84125ffacb90" name="package_numpy_1_7" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu">
|
|
|
13 <package name="numpy" version="1.7.1" />
|
|
|
14 </repository>
|
|
|
15 </action>
|
|
|
16
|
|
0
|
17 <action type="make_directory">$INSTALL_DIR/lib/python</action>
|
|
|
18 <action type="shell_command">
|
|
|
19 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &&
|
|
|
20 python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin</action>
|
|
|
21 <action type="set_environment">
|
|
|
22 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
|
|
|
23 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
|
|
|
24 <environment_variable action="set_to" name="BX_PYTHON_PATH">$INSTALL_DIR</environment_variable>
|
|
|
25 </action>
|
|
|
26 </actions>
|
|
|
27 </install>
|
|
|
28 <readme>
|
|
|
29 Installation of bx-python. The installation can be accessed via BX_PYTHON_PATH.
|
|
|
30 </readme>
|
|
|
31 </package>
|
|
|
32 </tool_dependency>
|
