Mercurial > repos > iuc > msa_datatypes
diff test-data/1.stockholm @ 0:ba3eba35a79d draft default tip
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author | iuc |
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date | Sun, 08 Sep 2013 05:07:09 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/1.stockholm Sun Sep 08 05:07:09 2013 -0400 @@ -0,0 +1,18 @@ +# STOCKHOLM 1.0 +#=GF ID UPSK +#=GF SE Predicted; Infernal +#=GF SS Published; PMID 9223489 +#=GF RN [1] +#=GF RM 9223489 +#=GF RT The role of the pseudoknot at the 3' end of turnip yellow mosaic +#=GF RT virus RNA in minus-strand synthesis by the viral RNA-dependent RNA +#=GF RT polymerase. +#=GF RA Deiman BA, Kortlever RM, Pleij CW; +#=GF RL J Virol 1997;71:5990-5996. + +AF035635.1/619-641 UGAGUUCUCGAUCUCUAAAAUCG +M24804.1/82-104 UGAGUUCUCUAUCUCUAAAAUCG +J04373.1/6212-6234 UAAGUUCUCGAUCUUUAAAAUCG +M24803.1/1-23 UAAGUUCUCGAUCUCUAAAAUCG +#=GC SS_cons .AAA....<<<<aaa....>>>> +//