Mercurial > repos > iuc > jbrowse
annotate test-data/gencode/test.xml @ 45:665c4f3e48ae draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
| author | iuc |
|---|---|
| date | Wed, 15 Nov 2017 15:14:41 -0500 |
| parents | c1451868f8d4 |
| children | c6fd9fbd50e7 |
| rev | line source |
|---|---|
| 16 | 1 <?xml version="1.0"?> |
| 2 <root> | |
| 3 <metadata> | |
| 4 <gencode>11</gencode> | |
| 5 <genomes> | |
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45
665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
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changeset
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6 <genome path="/tmp/tmpnh6QWY/files/000/dataset_3.dat"> |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
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diff
changeset
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7 <metadata> |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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8 <dataset id="54f2a3a23292eb07" hid="1" |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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9 size="171.6 KB" |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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10 edam_format="format_1929" |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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11 file_ext="fasta" /> |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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12 <history id="5729865256bc2525" |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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13 user_email="test@bx.psu.edu" |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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14 user_id="2" |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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15 display_name="test_history"/> |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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16 <metadata |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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17 dbkey="hg17" |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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18 data_lines="2881" |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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19 sequences="1" |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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20 /> |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
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diff
changeset
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21 <tool |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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22 tool_id="upload1" |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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23 tool_version="1.1.4" |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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24 /> |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
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diff
changeset
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25 </metadata> |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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26 </genome> |
| 16 | 27 </genomes> |
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34
6bfd32bd1000
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 78b61c12f3ee0bc7952d70e7e288d14592ce1ade
iuc
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diff
changeset
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28 <general> |
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6bfd32bd1000
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 78b61c12f3ee0bc7952d70e7e288d14592ce1ade
iuc
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diff
changeset
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29 <defaultLocation></defaultLocation> |
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42
c1451868f8d4
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 0bfb0de98c918860c21808e8832caad9f0535975
iuc
parents:
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changeset
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30 <trackPadding>20</trackPadding> |
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c1451868f8d4
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 0bfb0de98c918860c21808e8832caad9f0535975
iuc
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diff
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31 |
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34
6bfd32bd1000
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 78b61c12f3ee0bc7952d70e7e288d14592ce1ade
iuc
parents:
16
diff
changeset
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32 <shareLink>true</shareLink> |
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6bfd32bd1000
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 78b61c12f3ee0bc7952d70e7e288d14592ce1ade
iuc
parents:
16
diff
changeset
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33 <aboutDescription></aboutDescription> |
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6bfd32bd1000
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 78b61c12f3ee0bc7952d70e7e288d14592ce1ade
iuc
parents:
16
diff
changeset
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34 <show_tracklist>true</show_tracklist> |
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6bfd32bd1000
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 78b61c12f3ee0bc7952d70e7e288d14592ce1ade
iuc
parents:
16
diff
changeset
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35 <show_nav>true</show_nav> |
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42
c1451868f8d4
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 0bfb0de98c918860c21808e8832caad9f0535975
iuc
parents:
40
diff
changeset
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36 <show_overview>true</show_overview> |
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34
6bfd32bd1000
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 78b61c12f3ee0bc7952d70e7e288d14592ce1ade
iuc
parents:
16
diff
changeset
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37 <show_menu>true</show_menu> |
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6bfd32bd1000
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 78b61c12f3ee0bc7952d70e7e288d14592ce1ade
iuc
parents:
16
diff
changeset
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38 <hideGenomeOptions>false</hideGenomeOptions> |
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6bfd32bd1000
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 78b61c12f3ee0bc7952d70e7e288d14592ce1ade
iuc
parents:
16
diff
changeset
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39 </general> |
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45
665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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40 <galaxyUrl>http://localhost:8080</galaxyUrl> |
| 16 | 41 </metadata> |
| 42 <tracks> | |
| 43 </tracks> | |
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45
665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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44 <plugins |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
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diff
changeset
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45 ComboTrackSelector="" |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
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diff
changeset
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46 Bookmarks="" |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
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diff
changeset
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47 GCContent="" |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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48 theme="" |
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665c4f3e48ae
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
iuc
parents:
42
diff
changeset
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49 /> |
| 16 | 50 </root> |
