Mercurial > repos > iuc > datamash_transpose

changeset 10:3dcdff1ab5ac draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/datamash commit 178914e2f45c9d80bd4d88377c634593246b9f36
author iuc
date Tue, 18 Nov 2025 22:08:08 +0000
parents a1cdc32ea989
children
files datamash-transpose.xml macros.xml
diffstat 2 files changed, 7 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/datamash-transpose.xml	Thu Mar 23 20:46:30 2023 +0000
+++ b/datamash-transpose.xml	Tue Nov 18 22:08:08 2025 +0000
@@ -2,6 +2,7 @@
     <description>rows/columns in a tabular file</description>
     <macros>
         <import>macros.xml</import>
+        <token name="@VERSION_SUFFIX@">0</token>
     </macros>
     <edam_topics>
         <edam_topic>topic_3570</edam_topic> <!-- Pure math / linear algebra -->
@@ -13,7 +14,7 @@
     <expand macro="stdio"/>
     <command><![CDATA[
         #import os
-        #set file_size_MB = os.path.getsize(str($in_file)) / (1024 * 1024)
+        #set file_size_MB = $in_file.get_size() / (1024 * 1024)
         #set size_threshold_MB = 1024
         #if $file_size_MB <= $size_threshold_MB:
             datamash transpose @FIELD_SEPARATOR@ < $in_file > $out_file
--- a/macros.xml	Thu Mar 23 20:46:30 2023 +0000
+++ b/macros.xml	Tue Nov 18 22:08:08 2025 +0000
@@ -1,5 +1,5 @@
 <macros>
-    <token name="@TOOL_VERSION@">1.8</token>
+    <token name="@TOOL_VERSION@">1.9</token>
     <token name="@VERSION_SUFFIX@">0</token>
     <token name="@PROFILE@">22.01</token>
     <xml name="inputs_outputs">
@@ -31,11 +31,12 @@
 
 **GNU Datamash** is a Free and Open Source Software, see more details on the Datamash_ Website.
 
-**GNU Datamash** is also available as a command-line program, see http://www.gnu.org/software/datamash/download/ .
+For more details about supported statistical operations, see https://www.gnu.org/software/datamash/download/ 
 
 For more details about supported statistical operations, see Datamash_ website.
 
-.. _Datamash: http://www.gnu.org/software/datamash/
+.. _Datamash: https://www.gnu.org/software/datamash/
+
     </token>
     <token name="@HELP_HEADER@">
 .. class:: infomark
@@ -54,4 +55,4 @@
             </citation>
         </citations>
     </xml>
-</macros>
+</macros>
\ No newline at end of file