annotate macros.xml @ 8:6b5617f5d4ce draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 384736acb5d2ae31d796c53031fad0e5da5424e3
author iuc
date Fri, 01 Jul 2022 16:15:21 +0000
parents 70522b458053
children a1cdc32ea989
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
1 <macros>
7
70522b458053 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 206ac70388ea11b168366f1e30bb44157e371c6e"
iuc
parents: 6
diff changeset
2 <token name="@TOOL_VERSION@">1.1.0</token>
8
6b5617f5d4ce planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 384736acb5d2ae31d796c53031fad0e5da5424e3
iuc
parents: 7
diff changeset
3 <token name="@VERSION_SUFFIX@">2</token>
7
70522b458053 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 206ac70388ea11b168366f1e30bb44157e371c6e"
iuc
parents: 6
diff changeset
4 <token name="@PROFILE@">21.01</token>
0
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
5 <xml name="inputs_outputs">
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
6 <inputs>
7
70522b458053 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 206ac70388ea11b168366f1e30bb44157e371c6e"
iuc
parents: 6
diff changeset
7 <param name="in_file" type="data" format="tabular,csv,tsv" label="Input tabular dataset" help="" />
0
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
8 <yield />
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
9 </inputs>
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
10 <outputs>
7
70522b458053 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 206ac70388ea11b168366f1e30bb44157e371c6e"
iuc
parents: 6
diff changeset
11 <data name="out_file" format_source="in_file" label="${tool.name} on ${on_string}" />
0
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
12 </outputs>
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
13 </xml>
7
70522b458053 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 206ac70388ea11b168366f1e30bb44157e371c6e"
iuc
parents: 6
diff changeset
14 <token name="@FIELD_SEPARATOR@"><![CDATA[
70522b458053 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 206ac70388ea11b168366f1e30bb44157e371c6e"
iuc
parents: 6
diff changeset
15 #if $in_file.ext == 'csv'
70522b458053 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 206ac70388ea11b168366f1e30bb44157e371c6e"
iuc
parents: 6
diff changeset
16 -t ,
70522b458053 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 206ac70388ea11b168366f1e30bb44157e371c6e"
iuc
parents: 6
diff changeset
17 #end if
70522b458053 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 206ac70388ea11b168366f1e30bb44157e371c6e"
iuc
parents: 6
diff changeset
18 ]]></token>
0
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
19 <xml name="requirements">
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
20 <requirements>
7
70522b458053 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 206ac70388ea11b168366f1e30bb44157e371c6e"
iuc
parents: 6
diff changeset
21 <requirement type="package" version="@TOOL_VERSION@">datamash</requirement>
0
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
22 </requirements>
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
23 </xml>
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
24 <xml name="stdio">
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
25 <stdio>
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
26 <exit_code description="Error" level="fatal" range="1:" />
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
27 </stdio>
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
28 </xml>
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
29 <token name="@HELP_FOOTER@">
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
30 -----
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
31
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
32 **GNU Datamash** is a Free and Open Source Software, see more details on the Datamash_ Website.
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
33
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
34 **GNU Datamash** is also available as a command-line program, see http://www.gnu.org/software/datamash/download/ .
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
35
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
36 For more details about supported statistical operations, see Datamash_ website.
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
37
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
38 .. _Datamash: http://www.gnu.org/software/datamash/
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
39 </token>
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
40 <token name="@HELP_HEADER@">
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
41 .. class:: infomark
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
42
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
43 **TIP:** Input data must be TAB delimited. If the desired dataset does not appear in the input list, use *Text Manipulation->Convert* to convert it to **Tabular** type.
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
44
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
45 -----
6bc5c4e56518 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 1fa5e1a5cfac88256d484ec20c35fc319e6ceb3b
iuc
parents:
diff changeset
46 </token>
5
b987891f269c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 5a6df0b54ca66fb588886b4610bbd837cd624fed
iuc
parents: 0
diff changeset
47 </macros>