Mercurial > repos > iuc > data_manager_star_index_builder

annotate tool_data_table_conf.xml.test @ 12:66a8edd52132 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57d05675396f0b44265fb4dbc8f9f891c6073219
author iuc
date Thu, 05 Dec 2024 06:47:38 +0000
parents d2f4bfcf269a
children
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d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
diff changeset
1 <tables>
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
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2 <!-- Locations of all fasta files under genome directory -->
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
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3 <table name="all_fasta" comment_char="#">
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
diff changeset
4 <columns>value, dbkey, name, path</columns>
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
diff changeset
5 <file path="${__HERE__}/test-data/all_fasta.loc" />
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
diff changeset
6 </table>
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
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7 <!-- Locations of STAR indexes -->
12
66a8edd52132 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57d05675396f0b44265fb4dbc8f9f891c6073219
iuc
parents: 8
diff changeset
8 <table name="rnastar_index2x_versioned" comment_char="#" allow_duplicate_entries="False">
8
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
diff changeset
9 <columns>value, dbkey, name, path, with_gene_model, version</columns>
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66a8edd52132 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57d05675396f0b44265fb4dbc8f9f891c6073219
iuc
parents: 8
diff changeset
10 <file path="${__HERE__}/test-data/rnastar_index2x_versioned.loc" />
8
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
diff changeset
11 </table>
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
diff changeset
12 </tables>