Mercurial > repos > iuc > data_manager_primer_scheme_bedfiles

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 4880dcfcdddd9ed8415ccde01b2f8e2c28dab5c3"
author iuc
date Tue, 16 Nov 2021 08:21:30 +0000
parents 81e2fc2ad0cc
children
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81e2fc2ad0cc "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 5b749d0d81129ebc819fbe0df2ccd5d28af5c3cc"
iuc
parents:
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1 # this is a tab separated file describing the location of primer schemes used for amplicon
81e2fc2ad0cc "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 5b749d0d81129ebc819fbe0df2ccd5d28af5c3cc"
iuc
parents:
diff changeset
2 # sequencing (e.g. using the ARTIC SARS-CoV-2 protocol)
81e2fc2ad0cc "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 5b749d0d81129ebc819fbe0df2ccd5d28af5c3cc"
iuc
parents:
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3 #
81e2fc2ad0cc "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 5b749d0d81129ebc819fbe0df2ccd5d28af5c3cc"
iuc
parents:
diff changeset
4 # the columns are:
81e2fc2ad0cc "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 5b749d0d81129ebc819fbe0df2ccd5d28af5c3cc"
iuc
parents:
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5 # value description path
81e2fc2ad0cc "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 5b749d0d81129ebc819fbe0df2ccd5d28af5c3cc"
iuc
parents:
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6 #
81e2fc2ad0cc "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 5b749d0d81129ebc819fbe0df2ccd5d28af5c3cc"
iuc
parents:
diff changeset
7 # for example
81e2fc2ad0cc "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 5b749d0d81129ebc819fbe0df2ccd5d28af5c3cc"
iuc
parents:
diff changeset
8 # SARS-CoV-2-ARTICv1 SARS-CoV-2 ARTIC v1 primers /data/galaxy/tool_data/artic_primers/SARS-CoV-2-ARTICv1.bed