Mercurial > repos > iuc > data_manager_primer_scheme_bedfiles
diff test-data/primer_scheme_bedfiles.loc @ 2:81e2fc2ad0cc draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_primer_scheme_bedfiles commit 5b749d0d81129ebc819fbe0df2ccd5d28af5c3cc"
| author | iuc |
|---|---|
| date | Tue, 07 Jul 2020 00:06:31 +0000 |
| parents | |
| children | d8c2fea65c76 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/primer_scheme_bedfiles.loc Tue Jul 07 00:06:31 2020 +0000 @@ -0,0 +1,12 @@ +# this is a tab separated file describing the location of primer schemes used for amplicon +# sequencing (e.g. using the ARTIC SARS-CoV-2 protocol) +# +# the columns are: +# value description path +# +# for example +# SARS-CoV-2-ARTICv1 SARS-CoV-2 ARTIC v1 primers /data/galaxy/tool_data/artic_primers/SARS-CoV-2-ARTICv1.bed +SARS-CoV-2-ARTICv3 SARS-CoV-2-ARTIC v3 primer set /tmp/tmpYMFYgd/tmpdHhY2S/tmppwFSVU/database/data_manager_tool-dataI2hi9i/primer_scheme_bedfiles/SARS-CoV-2-ARTICv3.bed +SARS-CoV-2-ARTICv2 SARS-CoV-2-ARTIC v2 primer set /tmp/tmpYMFYgd/tmpdHhY2S/tmppwFSVU/database/data_manager_tool-dataI2hi9i/primer_scheme_bedfiles/SARS-CoV-2-ARTICv2.bed +SARS-CoV-2-ARTICv1 SARS-CoV-2-ARTIC v1 primer set /tmp/tmpYMFYgd/tmpdHhY2S/tmppwFSVU/database/data_manager_tool-dataI2hi9i/primer_scheme_bedfiles/SARS-CoV-2-ARTICv1.bed +sample_primer sample primer scheme /tmp/tmpYMFYgd/tmpdHhY2S/tmppwFSVU/database/data_manager_tool-dataI2hi9i/primer_scheme_bedfiles/sample_primer.bed