Mercurial > repos > iuc > data_manager_plant_tribes_scaffolds_downloader
changeset 5:8bb32fd5b175 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_plant_tribes_scaffolds_downloader commit 8652f36a3a3838dca989426961561e81432acf4f
| author | iuc |
|---|---|
| date | Tue, 04 Apr 2017 17:52:58 -0400 |
| parents | fe92a529ed01 |
| children | 404593d05354 |
| files | .shed.yml data_manager_conf.xml tool-data/plant_tribes_scaffolds.loc.sample tool_data_table_conf.xml.sample |
| diffstat | 4 files changed, 4 insertions(+), 24 deletions(-) [+] |
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--- a/.shed.yml Wed Feb 15 15:05:57 2017 -0500 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,12 +0,0 @@ -categories: -- Data Managers -description: Data Manager for installing PlantTribes scaffolds data -homepage_url: http://amborella.huck.psu.edu/ -long_description: | - PlantTribes is a collection of automated modular analysis pipelines that utilize objective - classifications of complete protein sequences from sequenced plant genomes to perform - comparative evolutionary studies. -name: data_manager_plant_tribes_scaffolds_downloader -owner: iuc -remote_repository_url: https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_plant_tribes_scaffolds_downloader -type: unrestricted
--- a/data_manager_conf.xml Wed Feb 15 15:05:57 2017 -0500 +++ b/data_manager_conf.xml Tue Apr 04 17:52:58 2017 -0400 @@ -14,14 +14,6 @@ <value_translation type="function">abspath</value_translation> </column> <column name="description" /> - <column name="config_path" output_ref="out_file"> - <move type="file"> - <source>${config_path}</source> - <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">plant_tribes/configs/${value}</target> - </move> - <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/plant_tribes/configs/${value}</value_translation> - <value_translation type="function">abspath</value_translation> - </column> </output> </data_table> </data_manager>
--- a/tool-data/plant_tribes_scaffolds.loc.sample Wed Feb 15 15:05:57 2017 -0500 +++ b/tool-data/plant_tribes_scaffolds.loc.sample Tue Apr 04 17:52:58 2017 -0400 @@ -1,4 +1,4 @@ ## Plant Tribes scaffolds -#Value Name Path Description Config Path -#22Gv1.0 22Gv1.0 /plant_tribes/scaffolds/22Gv1.0 22 plant genomes (Angiosperms clusters, version 1.0; 22Gv1.0) /plant_tribes/configs/22Gv1.0 -#22Gv1.1 22Gv1.1 /plant_tribes/scaffolds/22Gv1.1 22 plant genomes (Angiosperms clusters, version 1.1; 22Gv1.1) /plant_tribes/configs/22Gv1.1 +#Value Name Path Description +#22Gv1.0 22Gv1.0 /plant_tribes/scaffolds/22Gv1.0 22 plant genomes (Angiosperms clusters, version 1.0; 22Gv1.0) +#22Gv1.1 22Gv1.1 /plant_tribes/scaffolds/22Gv1.1 22 plant genomes (Angiosperms clusters, version 1.1; 22Gv1.1)
--- a/tool_data_table_conf.xml.sample Wed Feb 15 15:05:57 2017 -0500 +++ b/tool_data_table_conf.xml.sample Tue Apr 04 17:52:58 2017 -0400 @@ -1,6 +1,6 @@ <tables> <table name="plant_tribes_scaffolds" comment_char="#"> - <columns>value, name, path, description, config_path</columns> + <columns>value, name, path, description</columns> <file path="tool-data/plant_tribes_scaffolds.loc" /> </table> </tables>