Mercurial > repos > iuc > data_manager_nextclade
changeset 1:8b7bb3c635b1 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_nextclade commit 0617f25cbfdca61240f16b85ae21f3cd46b1a44e
| author | iuc |
|---|---|
| date | Sat, 06 Aug 2022 15:43:32 +0000 |
| parents | 6e64cb3d2b1d |
| children | |
| files | test-data/nextclade.loc tool-data/nextclade.loc |
| diffstat | 2 files changed, 9 insertions(+), 5 deletions(-) [+] |
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--- a/test-data/nextclade.loc Sat Jul 30 08:09:07 2022 +0000 +++ b/test-data/nextclade.loc Sat Aug 06 15:43:32 2022 +0000 @@ -1,10 +1,12 @@ # this is a tab separated file describing the location of nextclade databases used for the -# pangolin SARS-CoV-2 lineage typing tool +# nextclade viral lineage typing tool # # the columns are: # value database_name description min_nextclade_version date path # -# min_pangolin_version is the minimum pangolin tool major version that is needed to read the pangolin_data +# min_nextclade_version is the minimum nextclade tool major version that is needed to read the nextclade data +# +# the database_name refers to which dataset names that, in general, align with species names. for more details see the output of "nextclade dataset list" # # for example #sars-cov-2_2022-06-14T12:00:00Z sars-cov-2 SARS-CoV-2 1.10.0 2022-06-14T12:00:00 /srv/galaxy/tool-data/nextclade/sars-cov-2_2022-06-14T12-00-00Z
--- a/tool-data/nextclade.loc Sat Jul 30 08:09:07 2022 +0000 +++ b/tool-data/nextclade.loc Sat Aug 06 15:43:32 2022 +0000 @@ -1,10 +1,12 @@ -# this is a tab separated file describing the location of pangolin_data databases used for the -# pangolin SARS-CoV-2 lineage typing tool +# this is a tab separated file describing the location of nextclade databases used for the +# nextclade viral lineage typing tool # # the columns are: # value database_name description min_nextclade_version date path # -# min_pangolin_version is the minimum pangolin tool major version that is needed to read the pangolin_data +# min_nextclade_version is the minimum nextclade tool major version that is needed to read the nextclade data +# +# the database_name refers to which dataset names that, in general, align with species names. for more details see the output of "nextclade dataset list" # # for example #sars-cov-2_2022-06-14T12:00:00Z sars-cov-2 SARS-CoV-2 1.10.0 2022-06-14T12:00:00 /srv/galaxy/tool-data/nextclade/sars-cov-2_2022-06-14T12-00-00Z