Mercurial > repos > iuc > data_manager_meme_motif_database_downloader

changeset 1:c8f5faccb7ae draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author iuc
date Mon, 12 Mar 2018 14:48:53 -0400
parents 4ea70130da21
children b578eec2ffa2
files data_manager/data_manager_meme_motif_databases_downloader.xml tool-data/meme_motif_database.loc.sample tool-data/meme_motif_databases.loc.sample
diffstat 3 files changed, 10 insertions(+), 17 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager/data_manager_meme_motif_databases_downloader.xml	Mon Mar 12 13:07:43 2018 -0400
+++ b/data_manager/data_manager_meme_motif_databases_downloader.xml	Mon Mar 12 14:48:53 2018 -0400
@@ -1,18 +1,11 @@
-<tool id="data_manager_meme_motif_databases_downloader" name="MEME Motif Databases Download" version="1.1.0" tool_type="manage_data">
+<tool id="data_manager_meme_motif_databases_downloader" name="MEME Motif Databases Downloader" version="1.1.0" tool_type="manage_data">
     <description></description>
-    <stdio>
-        <exit_code range=":-1" level="fatal" description="Error: Cannot open file" />
-        <exit_code range="1:" level="fatal" description="Error" />
-    </stdio>
-    <command>
-        <![CDATA[
-            python $__tool_directory__/data_manager_meme_motif_databases_downloader.py
-            --name '$name'
-            --description '$description'
-            --web_url '$web_url'
-            --out_file '$out_file'
-        ]]>
-    </command>
+    <command detect_errors="exit_code"><![CDATA[
+python $__tool_directory__/data_manager_meme_motif_databases_downloader.py
+--name '$name'
+--description '$description'
+--web_url '$web_url'
+--out_file '$out_file']]></command>
     <inputs>
         <param name="name" type="text" value="" label="Data table entry unique ID"/>
         <param name="description" type="text" value="" label="Description of the data" help="Value is optional"/>
--- a/tool-data/meme_motif_database.loc.sample	Mon Mar 12 13:07:43 2018 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,3 +0,0 @@
-## MEME Motif Databases
-#Value	Name	Path	Description
-#2017_12	2017_12	/meme_motif_databases/2017_12	December 2017
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/meme_motif_databases.loc.sample	Mon Mar 12 14:48:53 2018 -0400
@@ -0,0 +1,3 @@
+## MEME Motif Databases
+#Value	Name	Path	Description
+#2017_12	2017_12	/meme_motif_databases/2017_12	December 2017