Mercurial > repos > iuc > data_manager_gemini_database_downloader
changeset 11:6889b7c5f316 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gemini_database_downloader commit 283362494058ed64143b1f27afb447b8a1cb4313
| author | iuc |
|---|---|
| date | Fri, 14 Dec 2018 12:20:20 -0500 |
| parents | 8885ab36d6b5 |
| children | d97a279e1e81 |
| files | data_manager/data_manager_gemini_download.xml |
| diffstat | 1 files changed, 8 insertions(+), 4 deletions(-) [+] |
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--- a/data_manager/data_manager_gemini_download.xml Fri Dec 07 12:45:42 2018 -0500 +++ b/data_manager/data_manager_gemini_download.xml Fri Dec 14 12:20:20 2018 -0500 @@ -1,11 +1,11 @@ <tool id="data_manager_gemini_download" name="GEMINI Download" version="@VERSION@.1" tool_type="manage_data"> - <description>Download a new database</description> + <description>the annotation files required by the GEMINI suite of tools</description> <macros> <token name="@VERSION@">0.18.1</token> <token name="@DB_VERSION@">181</token> </macros> <requirements> - <requirement type="package" version="0.18.1">gemini</requirement> + <requirement type="package" version="@VERSION@">gemini</requirement> </requirements> <command detect_errors="exit_code"> python '$__tool_directory__/data_manager_gemini_download.py' '$out_file' @@ -23,9 +23,13 @@ <tests> </tests> <help> -This tool downloads the GEMINI databases. +This tool downloads the GEMINI annotation files and makes them available to +corresponding versions of the GEMINI suite of tools. Downloading the (very large) CADD_ scores and GERP_ annotation files is optional. -For details about this tool, please go to http://gemini.readthedocs.org +Please visit http://gemini.readthedocs.io for details about GEMINI. + +.. _GERP: http://mendel.stanford.edu/SidowLab/downloads/gerp/index.html +.. _CADD: https://cadd.gs.washington.edu/ </help> <citations> <citation type="doi">10.1371/journal.pcbi.1003153</citation>