Mercurial > repos > iuc > dada2_dada

diff dada2_dada.xml @ 1:27b384992e75 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dada2 commit a82e4981dac025c909244acd7127c215bdb519a7"
author iuc
date Thu, 05 Dec 2019 22:54:35 +0000
parents 93a3cbe14318
children 4181dc15f538
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--- a/dada2_dada.xml	Fri Nov 08 18:42:22 2019 -0500
+++ b/dada2_dada.xml	Thu Dec 05 22:54:35 2019 +0000
@@ -104,7 +104,7 @@
             <param name="batch_cond|derep" value="filterAndTrim_F3D0_R1.fq.gz" ftype="fastq.gz" />
             <param name="err" value="learnErrors_F3D0_R1.Rdata" ftype="dada2_errorrates" />
             <output_collection name="data_collection" type="list">
-                <element name="filterAndTrim_F3D0_R1.fq.gz" file="dada_F3D0_R1.Rdata" ftype="dada2_dada"/>
+                <element name="filterAndTrim_F3D0_R1.fq.gz" file="dada_F3D0_R1.Rdata" ftype="dada2_dada" compare="sim_size" delta="10000"/>
             </output_collection>
         </test>
         <!-- default, batch -->
@@ -112,7 +112,7 @@
             <param name="batch_cond|batch_select" value="yes"/>
             <param name="batch_cond|derep" value="filterAndTrim_F3D0_R1.fq.gz" ftype="fastq.gz" />
             <param name="err" value="learnErrors_F3D0_R1.Rdata" ftype="dada2_errorrates" />
-            <output name="dada" value="dada_F3D0_R1.Rdata" ftype="dada2_dada" />
+            <output name="dada" value="dada_F3D0_R1.Rdata" ftype="dada2_dada"  compare="sim_size" delta="10000"/>
        </test>
         <!-- test non-default options -->
         <test>
@@ -121,7 +121,7 @@
             <param name="batch_cond|pool" value="pseudo"/>
             <param name="err" value="learnErrors_F3D0_R1.Rdata" ftype="dada2_errorrates" />
             <output_collection name="data_collection" type="list">
-                <element name="filterAndTrim_F3D0_R1.fq.gz" file="dada_F3D0_R1.Rdata" ftype="dada2_dada"/>
+                <element name="filterAndTrim_F3D0_R1.fq.gz" file="dada_F3D0_R1.Rdata" ftype="dada2_dada" compare="sim_size" delta="10000"/>
             </output_collection>
         </test>
     </tests>