Mercurial > repos > iuc > cat_summarise

annotate test-data/cached_locally/cat_database.loc @ 0:0c2e94e8db77 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit 863ad85836c80811d1d6b82eaf3ce903b273368a"
author iuc
date Tue, 10 Dec 2019 21:02:22 +0000
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0c2e94e8db77 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit 863ad85836c80811d1d6b82eaf3ce903b273368a"
iuc
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diff changeset
1 ## A typical download from https://tbb.bio.uu.nl/bastiaan/CAT_prepare/CAT_prepare_20190719.tar.gz
0c2e94e8db77 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit 863ad85836c80811d1d6b82eaf3ce903b273368a"
iuc
parents:
diff changeset
2 # ls CAT_prepare_20190719/
0c2e94e8db77 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit 863ad85836c80811d1d6b82eaf3ce903b273368a"
iuc
parents:
diff changeset
3 # 2019-07-19.CAT_prepare.fresh.log
0c2e94e8db77 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit 863ad85836c80811d1d6b82eaf3ce903b273368a"
iuc
parents:
diff changeset
4 # 2019-07-19_CAT_database
0c2e94e8db77 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit 863ad85836c80811d1d6b82eaf3ce903b273368a"
iuc
parents:
diff changeset
5 # 2019-07-19_taxonomy
0c2e94e8db77 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit 863ad85836c80811d1d6b82eaf3ce903b273368a"
iuc
parents:
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6 #value name database_folder taxonomy_folder
0c2e94e8db77 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit 863ad85836c80811d1d6b82eaf3ce903b273368a"
iuc
parents:
diff changeset
7 #2019-07-19_CAT_database 2019-07-19_CAT_database /opt/galaxy/tool-data/cat_database/CAT_prepare_20190719/2019-07-19_CAT_database /opt/galaxy/tool-data/cat_database/CAT_prepare_20190719/2019-07-19_taxonomy
0c2e94e8db77 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit 863ad85836c80811d1d6b82eaf3ce903b273368a"
iuc
parents:
diff changeset
8 CAT_prepare_test CAT_prepare_test ${__HERE__}/CAT_prepare_test/CAT_database ${__HERE__}/CAT_prepare_test/taxonomy