comparison cat_contigs.xml @ 1:f5d2f8a27477 draft

"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit b6c674376eade4fdf9ffb31380f6689ede84a091"

0:2feaf3d2805b

<tool id="cat_contigs" name="CAT contigs" version="@VERSION@.0">
    <description>annotate with taxonomic classification</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements" />

    ]]></command>
    <inputs>
        <param name="contigs_fasta" type="data" format="fasta" label="Contigs fasta"/>
        <expand macro="cat_db" />
        <expand macro="use_intermediates" />
        <expand macro="custom_settings" />
        <expand macro="diamond_options" />
        <expand macro="add_names" />
        <expand macro="summarise" />
        <expand macro="select_cat_outputs" />
    </inputs>

1:f5d2f8a27477

<tool id="cat_contigs" name="CAT contigs" version="@VERSION@.1">
    <description>annotate with taxonomic classification</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements" />

    ]]></command>
    <inputs>
        <param name="contigs_fasta" type="data" format="fasta" label="Contigs fasta"/>
        <expand macro="cat_db" />
        <expand macro="use_intermediates" />
        <expand macro="custom_settings_contigs" />
        <expand macro="diamond_options" />
        <expand macro="add_names" />
        <expand macro="summarise" />
        <expand macro="select_cat_outputs" />
    </inputs>