Mercurial > repos > iuc > bioext_bealign
changeset 5:b60b6e82b9c6 draft
"planemo upload for repository https://github.com/davebx/bioext-gx/ commit c21521441846e419a69366ee10a30aa828573095"
| author | iuc |
|---|---|
| date | Fri, 29 Oct 2021 18:10:00 +0000 |
| parents | 2859c35fa174 |
| children | 19eee96bc945 |
| files | bealign.xml macros.xml |
| diffstat | 2 files changed, 3 insertions(+), 3 deletions(-) [+] |
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--- a/bealign.xml Tue Oct 05 09:50:30 2021 +0000 +++ b/bealign.xml Fri Oct 29 18:10:00 2021 +0000 @@ -3,11 +3,11 @@ <description>to a reference using a codon alignment algorithm</description> <macros> <import>macros.xml</import> - <token name="@VERSION_SUFFIX@">2</token> + <token name="@VERSION_SUFFIX@">0</token> </macros> <expand macro="requirements"> <requirement type="package" version="5.1.0">gawk</requirement> - <requirement type="package" version="1.13">samtools</requirement> + <requirement type="package" version="1.14">samtools</requirement> </expand> <version_command>bealign --version</version_command> <command detect_errors="exit_code">
--- a/macros.xml Tue Oct 05 09:50:30 2021 +0000 +++ b/macros.xml Fri Oct 29 18:10:00 2021 +0000 @@ -1,6 +1,6 @@ <?xml version="1.0"?> <macros> - <token name="@TOOL_VERSION@">0.20.1</token> + <token name="@TOOL_VERSION@">0.20.2</token> <token name="@PROFILE@">20.05</token> <token name="@SANITIZE@"><![CDATA[| gawk '{ if (\$0 ~ "^[^>]") {a = gensub(/[^ACGTURYKMSWBDHVNacgturykmswbdhvn?-]/, "", "g"); } else {a=gensub(/[^>A-Za-z0-9_]/, "_", "g"); }; print a } ' | sed 's,_\\+,_,g' >]]></token> <xml name="requirements">