Mercurial > repos > iracooke > proteomics_datatypes

comparison datatypes_conf.xml @ 1:4198976f4e5e draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author iracooke
date Mon, 10 Mar 2014 19:38:57 -0400
parents 7101f7e4b00b
children a1b29f86bdbf
comparison
equal deleted inserted replaced
0:7101f7e4b00b 1:4198976f4e5e
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <datatypes> 2 <datatypes>
3 <datatype_files> 3 <datatype_files>
4 <datatype_file name="proteomics.py"/> 4 <datatype_file name="proteomics.py"/>
5 </datatype_files> 5 </datatype_files>
6 <registration display_path="display_applications"> 6 <registration display_path="display_applications">
7 <datatype extension="prot_gff" type="galaxy.datatypes.proteomics:ProtGff" mimetype="application/xml" display_in_upload="true">
8 <display file="proteomics/ProtGff.xml" />
9 </datatype>
10 <datatype extension="pepxml" type="galaxy.datatypes.proteomics:PepXml" mimetype="application/xml" display_in_upload="true"> 7 <datatype extension="pepxml" type="galaxy.datatypes.proteomics:PepXml" mimetype="application/xml" display_in_upload="true">
11 <display file="proteomics/PepXml.xml" /> 8 <display file="proteomics/PepXml.xml" />
12 </datatype> 9 </datatype>
13 <datatype extension="raw_pepxml" type="galaxy.datatypes.proteomics:PepXml" subclass="true"> 10 <datatype extension="raw_pepxml" type="galaxy.datatypes.proteomics:PepXml" mimetype="application/xml" subclass="true">
14 <display file="proteomics/PepXml.xml" /> 11 <display file="proteomics/PepXml.xml" />
15 </datatype> 12 </datatype>
16 <datatype extension="peptideprophet_pepxml" type="galaxy.datatypes.proteomics:PepXml" subclass="true"> 13 <datatype extension="peptideprophet_pepxml" type="galaxy.datatypes.proteomics:PepXml" mimetype="application/xml" subclass="true">
17 <display file="proteomics/PepXml.xml" /> 14 <display file="proteomics/PepXml.xml" />
18 </datatype> 15 </datatype>
19 <datatype extension="interprophet_pepxml" type="galaxy.datatypes.proteomics:PepXml" subclass="true"> 16 <datatype extension="interprophet_pepxml" type="galaxy.datatypes.proteomics:PepXml" mimetype="application/xml" subclass="true">
20 <display file="proteomics/PepXml.xml" /> 17 <display file="proteomics/PepXml.xml" />
21 </datatype> 18 </datatype>
22 <datatype extension="protxml" type="galaxy.datatypes.proteomics:ProtXML" display_in_upload="true" > 19 <datatype extension="protxml" type="galaxy.datatypes.proteomics:ProtXML" mimetype="application/xml" display_in_upload="true" >
23 <display file="proteomics/ProtXml.xml"/> 20 <display file="proteomics/ProtXml.xml"/>
24 </datatype> 21 </datatype>
22 <datatype extension="pepxml.tsv" type="galaxy.datatypes.proteomics:PepXmlReport" display_in_upload="true" />
23 <datatype extension="protxml.tsv" type="galaxy.datatypes.proteomics:ProtXmlReport" display_in_upload="true" />
25 <datatype extension="mascotdat" type="galaxy.datatypes.proteomics:MascotDat" display_in_upload="false" /> 24 <datatype extension="mascotdat" type="galaxy.datatypes.proteomics:MascotDat" display_in_upload="false" />
26 <datatype extension="mzml" type="galaxy.datatypes.proteomics:MzML" mimetype="application/xml" display_in_upload="true"> 25 <datatype extension="mzml" type="galaxy.datatypes.proteomics:MzML" mimetype="application/xml" display_in_upload="true">
27 <display file="proteomics/mzML.xml"/> 26 <display file="proteomics/mzML.xml"/>
27 <display file="proteomics/protvis_mzml.xml"/>
28 </datatype> 28 </datatype>
29 <datatype extension="mgf" type="galaxy.datatypes.proteomics:Mgf" display_in_upload="true" /> 29 <datatype extension="mgf" type="galaxy.datatypes.proteomics:Mgf" display_in_upload="true" />
30 <datatype extension="xls" type="galaxy.datatypes.proteomics:Xls" display_in_upload="true" /> 30 <datatype extension="idpdb" type="galaxy.datatypes.proteomics:IdpDB" display_in_upload="true" />
31 <datatype extension="wiff" type="galaxy.datatypes.proteomics:Wiff" display_in_upload="true" />
31 <datatype extension="mzxml" type="galaxy.datatypes.proteomics:MzXML" mimetype="application/xml" display_in_upload="true" /> 32 <datatype extension="mzxml" type="galaxy.datatypes.proteomics:MzXML" mimetype="application/xml" display_in_upload="true" />
32 <datatype extension="mzq" type="galaxy.datatypes.proteomics:MzQuantML" mimetype="application/xml" display_in_upload="true" /> 33 <datatype extension="mzq" type="galaxy.datatypes.proteomics:MzQuantML" mimetype="application/xml" display_in_upload="true" />
33 <datatype extension="mzid" type="galaxy.datatypes.proteomics:MzIdentML" mimetype="application/xml" display_in_upload="true" /> 34 <datatype extension="mzid" type="galaxy.datatypes.proteomics:MzIdentML" mimetype="application/xml" display_in_upload="true" />
34 <datatype extension="traML" type="galaxy.datatypes.proteomics:TraML" mimetype="application/xml" display_in_upload="true" /> 35 <datatype extension="traml" type="galaxy.datatypes.proteomics:TraML" mimetype="application/xml" display_in_upload="true" />
35 <datatype extension="raw" type="galaxy.datatypes.proteomics:RAW" display_in_upload="true" /> 36 <datatype extension="featurexml" type="galaxy.datatypes.proteomics:FeatureXML" mimetype="application/xml" display_in_upload="true" />
37 <datatype extension="consensusxml" type="galaxy.datatypes.proteomics:ConsensusXML" mimetype="application/xml" display_in_upload="true" />
38 <datatype extension="idxml" type="galaxy.datatypes.proteomics:IdXML" mimetype="application/xml" display_in_upload="true" />
39 <datatype extension="raw" type="galaxy.datatypes.proteomics:RAW" mimetype="application/octet-stream" display_in_upload="true" />
36 <datatype extension="msp" type="galaxy.datatypes.proteomics:Msp" display_in_upload="true" /> 40 <datatype extension="msp" type="galaxy.datatypes.proteomics:Msp" display_in_upload="true" />
37 <datatype extension="ms2" type="galaxy.datatypes.proteomics:Ms2" display_in_upload="true" /> 41 <datatype extension="ms2" type="galaxy.datatypes.proteomics:Ms2" display_in_upload="true" />
38 <datatype extension="hlf" type="galaxy.datatypes.proteomics:XHunterAslFormat" display_in_upload="true" /> 42 <datatype extension="hlf" type="galaxy.datatypes.proteomics:XHunterAslFormat" mimetype="application/octet-stream" display_in_upload="true" />
39 </registration> 43 </registration>
40 <sniffers> 44 <sniffers>
41 <sniffer type="galaxy.datatypes.proteomics:ProtGff"/> 45 <sniffer type="galaxy.datatypes.proteomics:ProtGff"/>
42 <sniffer type="galaxy.datatypes.proteomics:MzML"/> 46 <sniffer type="galaxy.datatypes.proteomics:MzML"/>
43 <sniffer type="galaxy.datatypes.proteomics:PepXml"/> 47 <sniffer type="galaxy.datatypes.proteomics:PepXml"/>
44 <sniffer type="galaxy.datatypes.proteomics:Mgf"/> 48 <sniffer type="galaxy.datatypes.proteomics:Mgf"/>
45 <sniffer type="galaxy.datatypes.proteomics:ProtXML"/> 49 <sniffer type="galaxy.datatypes.proteomics:ProtXML"/>
46 <sniffer type="galaxy.datatypes.proteomics:MzXML"/> 50 <sniffer type="galaxy.datatypes.proteomics:MzXML"/>
47 <sniffer type="galaxy.datatypes.proteomics:TraML"/> 51 <sniffer type="galaxy.datatypes.proteomics:TraML"/>
48 <sniffer type="galaxy.datatypes.proteomics:MzIdentML"/> 52 <sniffer type="galaxy.datatypes.proteomics:MzIdentML"/>
49 <sniffer type="galaxy.datatypes.proteomics:MzQuantML"/> 53 <sniffer type="galaxy.datatypes.proteomics:MzQuantML"/>
50 <sniffer type="galaxy.datatypes.proteomics:Xls"/>
51 </sniffers> 54 </sniffers>
52 </datatypes> 55 </datatypes>