Mercurial > repos > iracooke > package_msgfplus_20140210
changeset 1:244a1163f132 draft
Uploaded
author | iracooke |
---|---|
date | Wed, 05 Mar 2014 00:56:28 -0500 |
parents | 9b21b161ac97 |
children | 7d614a857e51 |
files | tool_dependencies.xml |
diffstat | 1 files changed, 10 insertions(+), 3 deletions(-) [+] |
line wrap: on
line diff
--- a/tool_dependencies.xml Mon Mar 03 00:20:38 2014 -0500 +++ b/tool_dependencies.xml Wed Mar 05 00:56:28 2014 -0500 @@ -3,15 +3,22 @@ <package name="msgfplus" version="20140210"> <install version="1.0"> <actions> - <action type="download_by_url">http://proteomics.ucsd.edu/Software/MSGFPlus/MSGFPlus.20140210.zip</action> + <action type="download_by_url">https://proteomics.ucsd.edu/Downloads/MSGFPlus.20140210.zip</action> + <action type="move_file"> + <source>MSGFPlus.jar</source> + <destination>$INSTALL_DIR</destination> + </action> <action type="set_environment"> + <environment_variable name="MSGFPLUS_ROOT" action="set_to">$INSTALL_DIR</environment_variable> + <environment_variable name="PROTK_MSGFPLUS_ROOT" action="set_to">$INSTALL_DIR</environment_variable> <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> </action> </actions> </install> <readme> - Installs MS-GF+. Requires java 1.6 or greater + Downloads and installs MSGF+. + https://proteomics.ucsd.edu/ + Java 1.6 is required to run MSGF+. </readme> </package> - </tool_dependency>