Mercurial > repos > imgteam > projective_transformation

changeset 1:1baeb1ec9d34 draft

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"planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/projective_transformation/ commit 3d389fdec0db29cf6fbd783c0501455bf624fa90"
author imgteam
date Wed, 18 Dec 2019 09:59:20 +0000
parents 0539c5178b1d
children 7224195de47a
files projective_transformation.py projective_transformation.xml
diffstat 2 files changed, 6 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/projective_transformation.py	Sat Feb 09 14:23:06 2019 -0500
+++ b/projective_transformation.py	Wed Dec 18 09:59:20 2019 +0000
@@ -3,9 +3,9 @@
 from scipy.ndimage import map_coordinates
 import numpy as np
 import pandas as pd
-import argparse
+import argparse 
 import warnings
-import shutil
+import shutil 
 
 
 def _stackcopy(a, b):
--- a/projective_transformation.xml	Sat Feb 09 14:23:06 2019 -0500
+++ b/projective_transformation.xml	Wed Dec 18 09:59:20 2019 +0000
@@ -1,12 +1,13 @@
-<tool id="ip_projective_transformation" name="Projective Transformation" version="0.0.4">
+<tool id="ip_projective_transformation" name="Projective Transformation" version="0.0.4"> 
     <description>Projective Transformation</description>
     <requirements>
         <requirement type="package" version="0.14.2">scikit-image</requirement>
         <requirement type="package" version="0.23.4">pandas</requirement>
         <requirement type="package" version="1.15.4">numpy</requirement>
-        <!--<requirement type="package" version="1.1.0">scipy</requirement>-->
+        <requirement type="package" version="1.1.0">scipy</requirement>
+        <requirement type="package" version="0.15.1">tifffile</requirement>
     </requirements>
-    <command>
+    <command detect_errors="aggressive">
     <![CDATA[
          python '$__tool_directory__/projective_transformation.py'
          '$fixed_image'