Mercurial > repos > imgteam > binary2labelimage
comparison binary2label.xml @ 0:1cde6ba34356 draft
planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/binary2labelimage/ commit c3f4b766f03770f094fda6bda0a5882c0ebd4581
| author | imgteam |
|---|---|
| date | Sat, 09 Feb 2019 14:13:08 -0500 |
| parents | |
| children | 37b99b904027 |
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| -1:000000000000 | 0:1cde6ba34356 |
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| 1 <tool id="ip_binary_to_labelimage" name="Binary 2 Label" version="0.2"> | |
| 2 <description>Converts Binary to Label Image</description> | |
| 3 <requirements> | |
| 4 <requirement type="package" version="0.12.3">scikit-image</requirement> | |
| 5 </requirements> | |
| 6 <command> | |
| 7 <![CDATA[ | |
| 8 python '$__tool_directory__/binary2label.py' '$input' '$output' | |
| 9 ]]> | |
| 10 </command> | |
| 11 <inputs> | |
| 12 <param name="input" type="data" format="tiff,png,jpg,bmp" label="Binary Image File"/> | |
| 13 </inputs> | |
| 14 <outputs> | |
| 15 <data format="tiff" name="output"/> | |
| 16 </outputs> | |
| 17 <tests> | |
| 18 <test> | |
| 19 <param name="input" value="galaxyIcon_noText.tif" /> | |
| 20 <output name="output" value="label.tif" ftype="tiff" /> | |
| 21 </test> | |
| 22 </tests> | |
| 23 <help> | |
| 24 **What it does** | |
| 25 | |
| 26 This tool assigns every object an own grey value. | |
| 27 </help> | |
| 28 <citations> | |
| 29 <citation type="doi">10.1016/j.jbiotec.2017.07.019</citation> | |
| 30 </citations> | |
| 31 </tool> |
