Mercurial > repos > ieguinoa > data_manager_star_index_custom
view data_manager_conf.xml @ 1:67c59c6576db draft
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author | ieguinoa |
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date | Thu, 26 Aug 2021 20:04:16 +0000 |
parents | e23440b3332a |
children | 0cd30e1fd3eb |
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<?xml version="1.0"?> <data_managers> <data_manager tool_file="data_manager/rna_star_index_builder.xml" id="rna_star_index_builder_data_manager_custom" version="0.0.7"> <data_table name="rnastar_index2x_versioned"> <output> <column name="value" /> <column name="dbkey" /> <column name="name" /> <column name="path" output_ref="out_file" > <move type="directory" relativize_symlinks="True"> <!-- <source>${path}</source> out_file.extra_files_path is used as base by default if no source, eg for type=directory, then refers to base --> <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">rnastar/${version}/${dbkey}/${value}/${path}</target> </move> <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/rnastar/${version}/${dbkey}/${value}/${path}</value_translation> <value_translation type="function">abspath</value_translation> </column> <column name="with_gene_model" /> <column name="version" /> </output> </data_table> </data_manager> </data_managers>