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diff snpEff_2_1a/scripts/compareToEnsembl.sh @ 0:f8eaa3f8194b default tip

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Uploaded snpEff_v2_1a_core.tgz from Pablo Cingolani
author greg
date Fri, 20 Apr 2012 14:47:09 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/snpEff_2_1a/scripts/compareToEnsembl.sh	Fri Apr 20 14:47:09 2012 -0400
@@ -0,0 +1,8 @@
+#!/bin/sh
+
+DIR=$HOME/snpEff/
+
+java -Xmx3G \
+	-classpath "$DIR/lib/charts4j-1.2.jar:$DIR/lib/flanagan.jar:$DIR/lib/freemarker.jar:$DIR/lib/junit.jar:$DIR/lib/trove-2.1.0.jar:$DIR" \
+	ca.mcgill.mcb.pcingola.testCases.CompareToEnsembl \
+	$*