Mercurial > repos > greg > phylogenomics_analysis

changeset 84:f0f02b73d5fe draft

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Uploaded
author greg
date Thu, 23 Mar 2017 07:57:59 -0400
parents bcb75754f5e7
children 7484a01c0b21
files phylogenomics_analysis.xml
diffstat 1 files changed, 1 insertions(+), 11 deletions(-) [+]
line wrap: on
line diff
--- a/phylogenomics_analysis.xml	Thu Mar 23 07:57:48 2017 -0400
+++ b/phylogenomics_analysis.xml	Thu Mar 23 07:57:59 2017 -0400
@@ -134,19 +134,9 @@
             </when>
             <when value="ptorthocs">
                 <param name="input_ptorthocs" format="ptorthocs" type="data" label="Precomputed orthologous gene family clusters with corresponding coding sequences" />
-                <expand macro="param_orthogroup_fna" />
                 <expand macro="param_scaffold" />
                 <expand macro="param_method" />
-                <conditional name="options_type_cond">
-                    <expand macro="param_options_type" />
-                    <when value="basic" />
-                    <when value="advanced">
-                        <expand macro="cond_multiple_sequence_alignments" />
-                        <expand macro="cond_phylogenetic_trees_ptorthocs" />
-                        <expand macro="cond_remove_gappy_sequences" />
-                        <expand macro="param_multiple_codon_alignments" />
-                    </when>
-                </conditional>
+                <expand macro="cond_orthogroup_fna" />
             </when>
         </conditional>
     </inputs>