Mercurial > repos > greg > phylogenomics_analysis

changeset 20:d34a42c6affb draft

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Uploaded
author greg
date Sat, 07 Jan 2017 09:48:59 -0500
parents 953e13d2940b
children 86a469a50fc4
files phylogenomics_analysis.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/phylogenomics_analysis.xml	Sat Jan 07 09:43:27 2017 -0500
+++ b/phylogenomics_analysis.xml	Sat Jan 07 09:48:59 2017 -0500
@@ -54,7 +54,7 @@
             mkdir -p $dest_fasta_dir &&
 
             PhylogenomicsAnalysis
-            --num_threads \${GALAXY_SLOTS:-4}
+            --num_threads "\${GALAXY_SLOTS:-4}"
             --orthogroup_faa "$orthogroup_faa.extra_files_path"
             --scaffold_dir "${GALAXY_DATA_INDEX_DIR}/plant_tribes/scaffolds"
             --scaffold "$scaffold"