comparison phylogenomics_analysis.xml @ 32:c2ec4bb1fd5f draft

Uploaded

31:40a1cb4c8426

            #end if

            mkdir -p $dest_fasta_dir &&

            PhylogenomicsAnalysis
            --num_threads "\${GALAXY_SLOTS:-4}"
            --orthogroup_faa "$orthogroup_faa.extra_files_path"
            --scaffold_dir "${GALAXY_DATA_INDEX_DIR}/plant_tribes/scaffolds"
            --scaffold "$scaffold"
            --method $method

32:c2ec4bb1fd5f

            #end if

            mkdir -p $dest_fasta_dir &&

            PhylogenomicsAnalysis
            --num_threads \${GALAXY_SLOTS:-4}
            --no_config_override
            --orthogroup_faa "$orthogroup_faa.extra_files_path"
            --scaffold_dir "${GALAXY_DATA_INDEX_DIR}/plant_tribes/scaffolds"
            --scaffold "$scaffold"
            --method $method