Mercurial > repos > greg > ideas_genome_tracks

changeset 24:928db0de5ee0 draft

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Uploaded
author greg
date Tue, 21 Nov 2017 08:33:53 -0500
parents 048a6d8d26a8
children 2b03f4780d9b
files ideas_genome_tracks.xml
diffstat 1 files changed, 14 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/ideas_genome_tracks.xml	Mon Nov 20 14:49:14 2017 -0500
+++ b/ideas_genome_tracks.xml	Tue Nov 21 08:33:53 2017 -0500
@@ -43,12 +43,15 @@
 -p '$input_dir_para'
 -q '$input_dir_state'
 -s '$sanitized_short_label'
+#if str($set_track_color_cond.set_track_color) == "yes":
+    -t $track_color
+#end if
 -w '$output_trackhub'
 -x '$output_trackhub.files_path'
 &>/dev/null
     ]]></command>
     <inputs>
-        <param name="input" format="txt" type="data_collection" collection_type="list" label="IDEAS files" />
+        <param name="input" format="txt" type="data_collection" collection_type="list" label="IDEAS files"/>
         <param name="hub_name" type="text" value="" label="Hub name" help="All white space characters will be eliminated">
             <validator type="empty_field"/>
         </param>
@@ -58,6 +61,16 @@
         <param name="long_label" type="text" value="long label" label="Long label" help="Limit to 80 characters">
             <validator type="empty_field"/>
         </param>
+        <conditional name="set_track_color_cond">
+            <param name="set_track_color" type="select" label="Specify track color?">
+                <option value="no" selected="true">No</option>
+                <option value="yes">Yes</option>
+            </param>
+            <when value="no"/>
+            <when value="yes">
+                <param name="track_color" type="color" label="Track color"/>
+            </when>
+        </conditional>
     </inputs>
     <outputs>
         <data name="output_trackhub" format="trackhub"/>