Mercurial > repos > greg > ideas_genome_tracks

changeset 101:63af12c8d253 draft default tip

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Uploaded
author greg
date Mon, 19 Feb 2018 10:21:52 -0500
parents 3eb3000360c1
children
files ideas_genome_tracks.R
diffstat 1 files changed, 3 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/ideas_genome_tracks.R	Fri Feb 16 13:31:31 2018 -0500
+++ b/ideas_genome_tracks.R	Mon Feb 19 10:21:52 2018 -0500
@@ -211,7 +211,7 @@
         # Get the bigDataUrl.
         big_data_url <- get_big_data_url(galaxy_url, encoded_dataset_id, trackhub_dir, i);
         track_db = c(track_db, paste("track ", hub_name, "_track_", i, sep=""));
-        track_db = c(track_db, "type bigBed");
+        track_db = c(track_db, "type bigBed 9 .");
         track_db = c(track_db, paste("bigDataUrl", big_data_url, sep=" "));
         track_db = c(track_db, paste("shortLabel", cell_info[ii, 2], sep=" "));
         track_db = c(track_db, paste("longLabel", paste(hub_name, cell_info[ii, 3], sep=" ")));
@@ -300,4 +300,5 @@
 write.table(track_db, file=track_db_file_path, quote=F, row.names=F, col.names=F);
 
 # Create the primary HTML dataset.
-create_primary_html(opt$output_trackhub, trackhub_dir);
\ No newline at end of file
+create_primary_html(opt$output_trackhub, trackhub_dir);
+