Mercurial > repos > greg > create_streamlines

changeset 11:7b98048e1904 draft

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Uploaded
author greg
date Thu, 30 Nov 2017 10:10:54 -0500
parents 95674a233981
children 883327c42970
files create_streamlines.xml
diffstat 1 files changed, 4 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/create_streamlines.xml	Wed Nov 29 14:15:07 2017 -0500
+++ b/create_streamlines.xml	Thu Nov 30 10:10:54 2017 -0500
@@ -5,14 +5,15 @@
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
 python '$__tool_directory__/create_streamlines.py'
+--input $input
+--input_extra_files_path '$input.extra_files_path'
 --output_trackvis_header '$output_trackvis_header'
 --output_superiorfrontal_nifti '$output_superiorfrontal_nifti'
+--output_superiorfrontal_nifti_files_path '$output_superiorfrontal_nifti.files_path'
 &>/dev/null
     ]]></command>
     <inputs>
-        <param name="drmi_dataset" type="select" label="dRMI dataset">
-            <option value="stanford_t1" selected="true">stanford_t1</option>
-        </param>
+        <param name="input" type="data" format="nifti1" label="dRMI dataset and label map"/>
     </inputs>
     <outputs>
         <data name="output_superiorfrontal_nifti" format="nifti1" label="${tool.name}: Superiorfrontal" />