Mercurial > repos > greg > affy2vcf

changeset 9:e981015b6b46 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author greg
date Thu, 11 Oct 2018 14:22:25 -0400
parents 192da25388ec
children 8f1660b17f90
files affy2vcf.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/affy2vcf.xml	Thu Oct 11 14:20:31 2018 -0400
+++ b/affy2vcf.xml	Thu Oct 11 14:22:25 2018 -0400
@@ -7,7 +7,7 @@
 #set text_outputs_dir = 'text_outputs'
 export BCFTOOLS_PLUGINS=\$(dirname `which bcftools`)/../libexec/bcftools &&
 mkdir $text_outputs_dir &&
-bcftools +$BCFTOOLS_PLUGINS/affy2vcf.so
+bcftools +\$BCFTOOLS_PLUGINS/affy2vcf.so
 #if str($reference_genome_source_cond.reference_genome_source) == "history":
     --fasta_ref '$reference_genome_source_cond.history_item'
 #else: