diff analysis_add_analysis.xml @ 11:bd4ba61d6b66 draft

planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit 0b135f1ea2623ea68e41ac88e13d99e6b4ad8bea

--- a/analysis_add_analysis.xml	Wed Apr 10 13:48:44 2019 -0400
+++ b/analysis_add_analysis.xml	Mon Jul 08 05:28:25 2019 -0400
@@ -6,7 +6,7 @@
     </macros>
     <expand macro="requirements"/>
     <command detect_errors="aggressive"><![CDATA[
-@AUTH@
+@START_PSQL@ &&
 
 chakin analysis add_analysis
 '$name'
@@ -31,8 +31,11 @@
 #end if
 
 | jq -S . > '$results'
+
+&& @ZIP_PSQL@
     ]]></command>
     <inputs>
+    <expand macro="psql_target"/>
     <!-- arguments -->
     <param name="name" label="Name" argument="name" type="text" help="analysis name" />
     <param name="program" label="Program" argument="program" type="text" help="analysis program" />
@@ -51,6 +54,9 @@
     </inputs>
     <outputs>
         <data format="json" name="results" label="Chado analysis add: ${name}"/>
+        <data format="postgresql" name="outfile" from_work_dir="postgresql_out.tar.bz2" label="${tool.name} '${name}' on ${on_string}">
+          <filter>psql_target['method'] == "pgtools"</filter>
+        </data>
     </outputs>
     <help>
 Create an analysis