Mercurial > repos > george-weingart > micropita
changeset 1:caffff6e32e2
Updated version of micropita -including image in the correct size
author | george-weingart |
---|---|
date | Mon, 05 May 2014 01:24:26 -0400 |
parents | d589875b8125 |
children | 31f689324222 |
files | micropita.xml |
diffstat | 1 files changed, 4 insertions(+), 0 deletions(-) [+] |
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--- a/micropita.xml Wed Apr 30 21:35:07 2014 -0400 +++ b/micropita.xml Mon May 05 01:24:26 2014 -0400 @@ -93,6 +93,8 @@ .. image:: https://bytebucket.org/biobakery/galaxy_micropita/wiki/HMPStool10PCoA.png + :height: 500 + :width: 600 MicroPITA unsupervised method selection in the HMP 16S Gut Microbiome. Selection of 10 samples using targeted feature targeting *Bacteroides* (blue), maximum diversity (orange), representative dissimilarity (purple), and most dissimilar (pink) using Principle Covariance Analysis (PCoA) for ordination. Targeted feature selects samples dominated by *Bacteroides* (upper left) while maximum diversity select more diverse samples away from *Bacteroides* dominant samples. Representative selection selects samples covering the range of samples in the PCoA plot focusing on the higher density central region while maximum dissimilarity selects samples at the periphery of the plot. @@ -120,6 +122,8 @@ **Note** MAC users, please save file as windows formatted text. .. image:: https://bytebucket.org/biobakery/galaxy_micropita/wiki/pcl_diagram.png + :height: 500 + :width: 600 Outputs -------