Mercurial > repos > george-weingart > lefse

changeset 14:937d9422d322 draft

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Uploaded
author george-weingart
date Tue, 19 Aug 2014 14:06:27 -0400
parents 80d718e5b0e1
children 42296bb88815
files run_lefse.xml
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/run_lefse.xml	Tue Aug 19 14:05:07 2014 -0400
+++ b/run_lefse.xml	Tue Aug 19 14:06:27 2014 -0400
@@ -4,7 +4,7 @@
 <command interpreter="python">run_lefse.py $inp_data $output -l $lda_th -a $kw_alpha -w $w_alpha -e $w_pol -y $multiclass -f 0.9</command> 
   <inputs>
     <page>
-	<param format="lefse_for" name="inp_data" type="data" label="Select data" help=""/>
+	<param format="lefse_internal_for" name="inp_data" type="data" label="Select data" help=""/>
 	<param name="kw_alpha" type="float" size="2" value="0.05" label="Alpha value for the factorial Kruskal-Wallis test among classes"/>
 	<param name="w_alpha" type="float" size="2" value="0.05" label="Alpha value for the pairwise Wilcoxon test between subclasses"/>
 	<param name="lda_th" type="float" size="2" value="2.0" label="Threshold on the logarithmic LDA score for discriminative features"/>
@@ -24,7 +24,7 @@
     </page>
    </inputs>
   <outputs>
-    <data format="lefse_res" name="output" />
+    <data format="lefse_internal_res" name="output" />
   </outputs>
   <tests>
     <test>