Mercurial > repos > geert-vandeweyer > mutect_wrapper

annotate tool_dependencies.xml @ 13:6aa310203a72 draft

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required all_fasta.loc.sample file
author geert-vandeweyer
date Mon, 17 Feb 2014 05:37:07 -0500
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <set_environment version="1.0">
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4 <environment_variable action="set_to" name="MUTECT_PATH">/please set the path to your GATK2 dir in the corresponding env.sh file/</environment_variable>
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5 </set_environment>
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6 <package name="samtools" version="0.1.18">
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7 <repository changeset_revision="c0f72bdba484" name="package_samtools_0_1_18" owner="devteam" toolshed="http://testtoolshed.g2.bx.psu.edu" />
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8 </package>
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9 </tool_dependency>