Mercurial > repos > ganjoo > webservice_toolsuite

annotate WebServiceToolWorkflow/WebServiceTool2.py~ @ 0:e7482c82796e default tip

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Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
author ganjoo
date Tue, 07 Jun 2011 17:34:26 -0400
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e7482c82796e Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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1 import warnings
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2 import platform
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3 import os,sys
e7482c82796e Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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4 from generateClient import *
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5 from generateClient1 import *
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7 ##input : wadl/wsdl/sawadl-url, method name
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8 ##generate a client as tool for Galaxy:
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9 #1. Add client xml address to Galaxy tool-conf.xml file - call edit_tool_conf.py
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10 #2. Generate client xml file - call generate client.py
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11
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12 url = sys.argv[2]
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13 urllist = url.split('.')
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14
e7482c82796e Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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15 #f=open(sys.argv[5],'w')
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16 #f.write('url: ' + url + '\t')
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17 #f.write('reached here 1')
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18 #f.close()
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19
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20 clientGenerator = ClientGenerator(sys.argv[2],sys.argv[3],sys.argv[4],sys.argv[5])
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21 clientGenerator1 = ClientGenerator1(sys.argv[2],sys.argv[3],sys.argv[4],sys.argv[5])
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22
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23 if urllist[len(urllist)-1]=='wadl' or urllist[len(urllist)-1]=='WADL':
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24 javahome = os.environ.get('JAVA_HOME')
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25 galaxyhome=os.environ.get('GALAXY_HOME')
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26 classpath= galaxyhome + '/tools/WebServiceToolWorkflow/ParserForWADL/bin'
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27 jarpath = galaxyhome + '/tools/WebServiceToolWorkflow/ParserForWADL/lib/'
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28 machine = platform.machine()
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29
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30 if machine == 'x86_64' :
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31 print 'a'
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32 startJVM("%s/jre/lib/amd64/server/libjvm.so" % javahome,"-ea", "-Djava.class.path=%s" % classpath,"-Djava.ext.dirs=%s" % jarpath)
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33 elif machine == 'i686' :
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34 print 'b'
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35 startJVM("%s/jre/lib/i386/server/libjvm.so" % javahome,"-ea", "-Djava.class.path=%s" % classpath,"-Djava.ext.dirs=%s" % jarpath)
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36 elif machine == 'sun4u' :
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37 startJVM("%s/jre/lib/sparc/server/libjvm.so" % javahome,"-ea", "-Djava.class.path=%s" % classpath,"-Djava.ext.dirs=%s" % jarpath)
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38 else :
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39 print 'c'
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40 System.exit("Could not identify machine, please specify path to libjvm.so")
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41 clientGenerator1.wadlClient()
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42 clientGenerator.wadlClient()
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43
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44 elif urllist[len(urllist)-1]=='wsdl' or urllist[len(urllist)-1]=='WSDL':
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45 clientGenerator.wsdlClient()
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46 clientGenerator1.wsdlClient()
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47 elif urllist[len(urllist)-1]=='sawadl' or urllist[len(urllist)-1]=='SAWADL':
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48
e7482c82796e Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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49 javahome = os.environ.get('JAVA_HOME')
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50 galaxyhome=os.environ.get('GALAXY_HOME')
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51 classpath= galaxyhome + '/tools/WebServiceToolWorkflow/lib/SAWADLParser/bin'
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52 jarpath = galaxyhome + '/tools/WebServiceToolWorkflow/lib/'
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53 machine = platform.machine()
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54
e7482c82796e Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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55 if machine == 'x86_64' :
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56 print 'a'
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57 startJVM("%s/jre/lib/amd64/server/libjvm.so" % javahome,"-ea", "-Djava.class.path=%s" % classpath,"-Djava.ext.dirs=%s" % jarpath)
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58 elif machine == 'i686' :
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59 print 'b'
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60 startJVM("%s/jre/lib/i386/server/libjvm.so" % javahome,"-ea", "-Djava.class.path=%s" % classpath,"-Djava.ext.dirs=%s" % jarpath)
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61 elif machine == 'sun4u' :
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62 startJVM("%s/jre/lib/sparc/server/libjvm.so" % javahome,"-ea", "-Djava.class.path=%s" % classpath,"-Djava.ext.dirs=%s" % jarpath)
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63 else :
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64 print 'c'
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65 System.exit("Could not identify machine, please specify path to libjvm.so")
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66
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67 #f=open(sys.argv[5],'w')
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68 #f.write('reached here 2 \t')
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69 #f.close()
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70
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71 clientGenerator.sawadlClient()
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72 clientGenerator1.sawadlClient()
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73 #f=open(sys.argv[5],'w')
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74 #f.write('reached here 3')
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75 #f.close()
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