Mercurial > repos > galaxyp > suite_openms

changeset 1:8418797eca11 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 9ad38d2c943c37d0ddbbc3706302e7461b3c356c
author galaxyp
date Sat, 08 Apr 2017 08:48:33 -0400
parents e1c3604ca7da
children 5d9777039117
files repository_dependencies.xml
diffstat 1 files changed, 120 insertions(+), 120 deletions(-) [+]
line wrap: on
line diff
--- a/repository_dependencies.xml	Wed Mar 01 10:22:33 2017 -0500
+++ b/repository_dependencies.xml	Sat Apr 08 08:48:33 2017 -0400
@@ -1,141 +1,141 @@
 <?xml version="1.0"?>
-<repositories description="OpenMS Suite for LC/MS data management and analyses">  <repository changeset_revision="83818b56fd8c" name="openms_openswathrtnormalizer" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="bb36816527e8" name="openms_decoydatabase" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="f6081d1fc21d" name="openms_metabolitespectralmatcher" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="51dbe5760168" name="openms_idripper" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="f24ef0b2174b" name="openms_inspectadapter" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="6f21d53eae5a" name="openms_fidoadapter" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="59692e631ad1" name="openms_mapnormalizer" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="63d0324e37cb" name="openms_featurefinderisotopewavelet" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+<repositories description="OpenMS Suite for LC/MS data management and analyses">  <repository changeset_revision="8c50e8e50ea5" name="openms_accuratemasssearch" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="0758a5db391d" name="openms_additiveseries" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="79beb43a01fb" name="openms_baselinefilter" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="7fd35becd995" name="openms_cvinspector" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="b4c026e01f21" name="openms_compnovo" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="0a6de13f7148" name="openms_openswathfeaturexmltotsv" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="69507f99bfaa" name="openms_compnovocid" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="2b1f6887cd42" name="openms_consensusid" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="46ce06cffb97" name="openms_consensusmapnormalizer" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="ca5373be783c" name="openms_ptpredict" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="d53ccfc9c11f" name="openms_precursorionselector" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="c46d7959da66" name="openms_converttsvtotraml" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="af992fac14d2" name="openms_converttramltotsv" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="5f34a3bd4f2f" name="openms_dtaextractor" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="3ee98821ae85" name="openms_demeanderize" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="e12e318f1df2" name="openms_decharger" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="bb36816527e8" name="openms_decoydatabase" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="80be08177c91" name="openms_digestor" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="fa55ebceffd4" name="openms_digestormotif" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="452246c7527d" name="openms_eicextractor" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="956a230f67d6" name="openms_erpairfinder" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="40cb91bfc04b" name="openms_externalcalibration" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="e3e4800c7bb6" name="openms_ffeval" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="63290cfc707b" name="openms_falsediscoveryrate" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="6cf7e57d3e6e" name="openms_featurefindercentroided" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="b83b7b27edd9" name="openms_featurefinderidentification" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="63d0324e37cb" name="openms_featurefinderisotopewavelet" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="2c09494ba6b8" name="openms_featurefindermrm" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="9467063b6efa" name="openms_featurefindermetabo" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="c46d7959da66" name="openms_converttsvtotraml" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="2741adc39601" name="openms_peakpickerhires" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="ae2d145ecafc" name="openms_noisefiltersgolay" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="8cb176440e93" name="openms_rtevaluation" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="32529b5887fd" name="openms_isobaricanalyzer" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="58ffb7d0cc7e" name="openms_openswathassaygenerator" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="8abd89528480" name="openms_featurefindermultiplex" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="322cc6368498" name="openms_featurefindersuperhirn" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="63290cfc707b" name="openms_falsediscoveryrate" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="df1598c0e6c0" name="openms_noisefiltergaussian" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="94cf986ea251" name="openms_featurelinkerlabeled" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="99cddbdea61c" name="openms_featurelinkerunlabeled" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="afaf570ceaae" name="openms_featurelinkerunlabeledqt" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="6f21d53eae5a" name="openms_fidoadapter" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="dc1889e76546" name="openms_fileconverter" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="c0bf230a772c" name="openms_filefilter" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="78cb3ff753bc" name="openms_fileinfo" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="110f7ab62e67" name="openms_filemerger" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="34e4f136ff49" name="openms_maprttransformer" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="fc8ae76781bd" name="openms_idmassaccuracy" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="8c50e8e50ea5" name="openms_accuratemasssearch" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="2c09494ba6b8" name="openms_featurefindermrm" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="afaf570ceaae" name="openms_featurelinkerunlabeledqt" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="949f2205a2b1" name="openms_openswathconfidencescoring" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="38df6b43bc2d" name="openms_fuzzydiff" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="2a5600214a90" name="openms_highresprecursormasscorrector" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="1ddb1b5968a4" name="openms_idconflictresolver" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="99effccd5e83" name="openms_iddecoyprobability" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="3670647ca92a" name="openms_idextractor" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="176d8790394c" name="openms_idfileconverter" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="e3e4800c7bb6" name="openms_ffeval" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="c63f79dedc5c" name="openms_idscoreswitcher" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="3ef378e41673" name="openms_inclusionexclusionlistcreator" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="f60e2d8efb2b" name="openms_qccalculator" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a5c11182e118" name="openms_peakpickerwavelet" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="ef808a9333f7" name="openms_qcexporter" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="d8b9885e4a72" name="openms_spectrafilterthresholdmower" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="7ae1f5c7eaeb" name="openms_spectrafiltersqrtmower" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="6cf7e57d3e6e" name="openms_featurefindercentroided" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="15f24bf185d5" name="openms_spectrafilterparentpeakmower" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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-  <repository changeset_revision="44ab28351d2a" name="openms_rtmodel" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="ad7ede8b0bfc" name="openms_xmlvalidator" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="020a1a552da0" name="openms_phosphoscoring" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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-  <repository changeset_revision="80be08177c91" name="openms_digestor" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="fc8ae76781bd" name="openms_idmassaccuracy" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="8397ceb174cc" name="openms_idmerger" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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-  <repository changeset_revision="9773c62ee275" name="openms_openswathfilesplitter" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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-  <repository changeset_revision="e12e318f1df2" name="openms_decharger" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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-  <repository changeset_revision="c561e6fb46d8" name="openms_spectramerger" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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+  <repository changeset_revision="4efc6612e238" name="openms_mrmmapper" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="53892df16f42" name="openms_mrmpairfinder" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="006142eda968" name="openms_mrmtransitiongrouppicker" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="65a1b411e932" name="openms_msgfplusadapter" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="ae8e96c8f9a4" name="openms_mssimulator" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="45b224df8ccf" name="openms_mapalignmentevaluation" owner="galaxyp" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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