Mercurial > repos > galaxyp > openms_filemerger
changeset 6:33e3f62dcf23 draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit ba082ee3343087740aaa741120b1f575646183a4
| author | galaxyp |
|---|---|
| date | Fri, 18 Aug 2017 06:49:32 -0400 |
| parents | 07121f8410b9 |
| children | fd602130afb3 |
| files | FileMerger.xml |
| diffstat | 1 files changed, 3 insertions(+), 14 deletions(-) [+] |
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--- a/FileMerger.xml Mon Aug 07 14:33:57 2017 -0400 +++ b/FileMerger.xml Fri Aug 18 06:49:32 2017 -0400 @@ -26,16 +26,6 @@ -rt_concat:gap $param_rt_concat_gap #end if -#if $rep_param_rt_concat_trafo_out: --rt_concat:trafo_out - #for token in $rep_param_rt_concat_trafo_out: - #if " " in str(token): - "$token.param_rt_concat_trafo_out" - #else - $token.param_rt_concat_trafo_out - #end if - #end for -#end if #if $param_raw_rt_auto: -raw:rt_auto #end if @@ -74,8 +64,8 @@ <param name="param_annotate_file_origin" display="radio" type="boolean" truevalue="-annotate_file_origin" falsevalue="" checked="false" optional="True" label="Store the original filename in each feature using meta value "file_origin" (for featureXML and consensusXML only)" help="(-annotate_file_origin) "/> <param name="param_rt_concat_gap" type="float" value="0.0" label="The amount of gap (in seconds) to insert between the RT ranges of different input files" help="(-gap) RT concatenation is enabled if a value > 0 is set"/> <param name="param_raw_rt_auto" display="radio" type="boolean" truevalue="-raw:rt_auto" falsevalue="" checked="false" optional="True" label="Assign retention times automatically (integers starting at 1)" help="(-rt_auto) "/> - <repeat name="rep_param_raw_rt_custom" min="0" max="1" title="param_raw_rt_custom"> - <param name="param_raw_rt_custom" type="text" size="30" value="0" label="List of custom retention times that are assigned to the files" help="(-rt_custom) The number of given retention times must be equal to the number of input files"> + <repeat name="rep_param_raw_rt_custom" min="0" title="param_raw_rt_custom"> + <param name="param_raw_rt_custom" type="text" size="30" value="0" label="Custom retention times that are assigned to the files" help="(-rt_custom) The number of given retention times must be equal to the number of input files"> <sanitizer> <valid initial="string.printable"> <remove value="'"/> @@ -91,8 +81,7 @@ </expand> </inputs> <outputs> - <data name="param_out" format="featurexml"/> - <data name="param_rt_concat_trafo_out" format="trafoxml"/> + <data name="param_out" format="mzml"/> </outputs> <help>Merges several MS files into one file.