Mercurial > repos > galaxyp > mz_to_sqlite

diff mz_to_sqlite.xml @ 2:8df9fe030d68 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mz_to_sqlite commit 2c0016faa867da59ca020587f3b704e70e16c7ca-dirty
author galaxyp
date Fri, 17 Jun 2016 15:03:22 -0400
parents 77389cf7ff62
children c8bdcf574413
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--- a/mz_to_sqlite.xml	Wed Aug 05 14:19:57 2015 -0500
+++ b/mz_to_sqlite.xml	Fri Jun 17 15:03:22 2016 -0400
@@ -1,7 +1,7 @@
-<tool id="mz_to_sqlite" name="mz to sqlite" version="1.0.0">
+<tool id="mz_to_sqlite" name="mz to sqlite" version="1.2.0">
     <description>Extract mzIdentML and associated proteomics datasets into a SQLite DB</description>
     <requirements>
-      <requirement type="package" version="1.0.0">mztosqlite</requirement>
+      <requirement type="package" version="1.2.0">mztosqlite</requirement>
     </requirements>
    <stdio>
        <exit_code range="1:"  level="fatal" description="Error Running mz_to_sqlite" />
@@ -23,7 +23,7 @@
     <inputs>
         <param name="mzinputs" type="data" format="mzid" multiple="true" optional="true" label="Proteomics Identification files"/>
         <param name="scanfiles" type="data" format="mzml,mgf" multiple="true" optional="true" label="Proteomics Spectrum files"/>
-        <param name="searchdbs" type="data" format="fasta" multiple="true" optional="true" label="Proteomics Search Database Fasta"
+        <param name="searchdbs" type="data" format="fasta,uniprotxml" multiple="true" optional="true" label="Proteomics Search Database Fasta"
                help="These can provide sequences and length for proteins if not already present in the mzIdentML input"/>
     </inputs>
     <outputs>