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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msconvert commit dc0103e36b921e9bcb86f9e9a402d8e6b4c47345-dirty
author galaxyp
date Fri, 08 Apr 2016 15:49:36 -0400
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a7be99276cf7 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msconvert commit dc0103e36b921e9bcb86f9e9a402d8e6b4c47345-dirty
galaxyp
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1 **NOTE**
a7be99276cf7 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msconvert commit dc0103e36b921e9bcb86f9e9a402d8e6b4c47345-dirty
galaxyp
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2 This tool must be run on a Windows Operating System.
a7be99276cf7 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msconvert commit dc0103e36b921e9bcb86f9e9a402d8e6b4c47345-dirty
galaxyp
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a7be99276cf7 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msconvert commit dc0103e36b921e9bcb86f9e9a402d8e6b4c47345-dirty
galaxyp
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4 Your system administrator will need to:
a7be99276cf7 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msconvert commit dc0103e36b921e9bcb86f9e9a402d8e6b4c47345-dirty
galaxyp
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a7be99276cf7 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msconvert commit dc0103e36b921e9bcb86f9e9a402d8e6b4c47345-dirty
galaxyp
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6 - install proteowizard on a windows server
a7be99276cf7 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msconvert commit dc0103e36b921e9bcb86f9e9a402d8e6b4c47345-dirty
galaxyp
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7 http://proteowizard.sourceforge.net/downloads.shtml
a7be99276cf7 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msconvert commit dc0103e36b921e9bcb86f9e9a402d8e6b4c47345-dirty
galaxyp
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a7be99276cf7 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msconvert commit dc0103e36b921e9bcb86f9e9a402d8e6b4c47345-dirty
galaxyp
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9 - install the galaxy pulsar rest server on the windows server
a7be99276cf7 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msconvert commit dc0103e36b921e9bcb86f9e9a402d8e6b4c47345-dirty
galaxyp
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10 http://pulsar.readthedocs.org/en/latest/
a7be99276cf7 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msconvert commit dc0103e36b921e9bcb86f9e9a402d8e6b4c47345-dirty
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a7be99276cf7 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msconvert commit dc0103e36b921e9bcb86f9e9a402d8e6b4c47345-dirty
galaxyp
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12 - setup the galaxy job_conf.xml to send msconvert jobs to the windows server via pulsar
a7be99276cf7 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msconvert commit dc0103e36b921e9bcb86f9e9a402d8e6b4c47345-dirty
galaxyp
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13 https://wiki.galaxyproject.org/Admin/Config/Performance/Cluster
a7be99276cf7 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msconvert commit dc0103e36b921e9bcb86f9e9a402d8e6b4c47345-dirty
galaxyp
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14 https://wiki.galaxyproject.org/Admin/Config/Jobs
a7be99276cf7 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msconvert commit dc0103e36b921e9bcb86f9e9a402d8e6b4c47345-dirty
galaxyp
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15 http://pulsar.readthedocs.org/en/latest/job_managers.html