diff test-data/small-peakpicking-cwt-allMS.mzML @ 6:6b6bba73eadb draft

planemo upload commit d56659dd48f8c554a832787e71aca6ae65c90848

--- a/test-data/small-peakpicking-cwt-allMS.mzML	Mon Dec 12 17:07:11 2016 -0500
+++ b/test-data/small-peakpicking-cwt-allMS.mzML	Tue Mar 14 16:52:39 2017 -0400
@@ -2,7 +2,7 @@
 <indexedmzML xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.2_idx.xsd">
   <mzML xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.0.xsd" id="small" version="1.1.0">
     <cvList count="2">
-      <cv id="MS" fullName="Proteomics Standards Initiative Mass Spectrometry Ontology" version="3.79.0" URI="http://psidev.cvs.sourceforge.net/*checkout*/psidev/psi/psi-ms/mzML/controlledVocabulary/psi-ms.obo"/>
+      <cv id="MS" fullName="Proteomics Standards Initiative Mass Spectrometry Ontology" version="4.0.1" URI="http://psidev.cvs.sourceforge.net/*checkout*/psidev/psi/psi-ms/mzML/controlledVocabulary/psi-ms.obo"/>
       <cv id="UO" fullName="Unit Ontology" version="12:10:2011" URI="http://obo.cvs.sourceforge.net/*checkout*/obo/obo/ontology/phenotype/unit.obo"/>
     </cvList>
     <fileDescription>
@@ -34,7 +34,7 @@
       <software id="pwiz" version="3.0.8981">
         <cvParam cvRef="MS" accession="MS:1000615" name="ProteoWizard software" value=""/>
       </software>
-      <software id="pwiz_3.0.8990" version="3.0.8990">
+      <software id="pwiz_3.0.9987" version="3.0.9987">
         <cvParam cvRef="MS" accession="MS:1000615" name="ProteoWizard software" value=""/>
       </software>
     </softwareList>
@@ -79,10 +79,10 @@
         </processingMethod>
       </dataProcessing>
       <dataProcessing id="pwiz_Reader_conversion">
-        <processingMethod order="0" softwareRef="pwiz_3.0.8990">
+        <processingMethod order="0" softwareRef="pwiz_3.0.9987">
           <cvParam cvRef="MS" accession="MS:1000544" name="Conversion to mzML" value=""/>
         </processingMethod>
-        <processingMethod order="1" softwareRef="pwiz_3.0.8990">
+        <processingMethod order="1" softwareRef="pwiz_3.0.9987">
           <cvParam cvRef="MS" accession="MS:1000035" name="peak picking" value=""/>
         </processingMethod>
       </dataProcessing>
@@ -1269,7 +1269,7 @@
             </binaryDataArray>
           </binaryDataArrayList>
         </spectrum>
-        <spectrum index="22" id="controllerType=0 controllerNumber=1 scan=23" defaultArrayLength="701" dataProcessingRef="pwiz_Reader_conversion">
+        <spectrum index="22" id="controllerType=0 controllerNumber=1 scan=23" defaultArrayLength="700" dataProcessingRef="pwiz_Reader_conversion">
           <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum" value=""/>
           <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="1"/>
           <cvParam cvRef="MS" accession="MS:1000130" name="positive scan" value=""/>
@@ -1295,17 +1295,17 @@
             </scan>
           </scanList>
           <binaryDataArrayList count="2">
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+            <binaryDataArray encodedLength="4344">
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               <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value=""/>
               <cvParam cvRef="MS" accession="MS:1000514" name="m/z array" value="" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z"/>
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