Mercurial > repos > galaxyp > mqppep_preproc

annotate macros.xml @ 5:37203e501ea6 draft default tip

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit aa5f4a19e76ec636812865293b8ee9b196122121
author galaxyp
date Fri, 17 Feb 2023 22:38:08 +0000
parents 17e7a50939b3
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ba62d93a9ef5 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
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1 <macros>
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2 <token name="@TOOL_VERSION@">0.1.19</token>
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3 <token name="@VERSION_SUFFIX@">0</token>
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4 <xml name="requirements">
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5 <requirements>
ba62d93a9ef5 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
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6 <requirement type="package" version="1.56.0" >bioconductor-preprocesscore</requirement>
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7 <requirement type="package" version="6.2.1" >gmp</requirement>
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8 <requirement type="package" version="1.23.4" >numpy</requirement>
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9 <requirement type="package" version="0.3.3" >openblas</requirement>
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10 <requirement type="package" version="1.5.1" >pandas</requirement>
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11 <requirement type="package" version="1.70" >perl-dbd-sqlite</requirement>
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12 <requirement type="package" version="5.32.1" >perl</requirement>
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13 <requirement type="package" version="1.4.4" >pyahocorasick</requirement>
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14 <requirement type="package" version="3.10.6" >python</requirement>
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15 <requirement type="package" version="4.1.3" >r-base</requirement>
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16 <requirement type="package" version="6.0_93" >r-caret</requirement>
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17 <requirement type="package" version="1.14.4" >r-data.table</requirement>
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18 <requirement type="package" version="1.1.3" >r-dbi</requirement>
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19 <requirement type="package" version="3.3.6" >r-ggplot2</requirement>
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20 <requirement type="package" version="3.1.3" >r-gplots</requirement>
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21 <requirement type="package" version="0.9.5" >r-latex2exp</requirement>
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22 <requirement type="package" version="1.7.3" >r-optparse</requirement>
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23 <requirement type="package" version="1.4.4" >r-reshape2</requirement>
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24 <requirement type="package" version="2.17" >r-rmarkdown</requirement>
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25 <!--
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26 <requirement type="package" version="2.2.18" >r-rsqlite</requirement>
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27 <requirement type="package" version="0.4.2" >r-sass</requirement>
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28 -->
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29 <requirement type="package" version="1.2.2" >r-sessioninfo</requirement>
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30 <requirement type="package" version="0.4_11" >r-sqldf</requirement>
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31 <requirement type="package" version="1.4.1" >r-stringr</requirement>
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32 <requirement type="package" version="0.42" >r-tinytex</requirement>
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33 <requirement type="package" version="0.3.7" >r-vioplot</requirement>
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34 <!--
ba62d93a9ef5 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
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35 It would be nice to use conda-forge/texlive-core rather than r-tinytex because the
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2ccb9727516b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 43e7a43b545c24b2dc33d039198551c032aa79be
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36 former installs texlive when the package is built, but issue 19/61 blocked PDF-creation.
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37 Also, texlive-core also gave pango font errors (output had missing symbols replaced
ba62d93a9ef5 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
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38 with boxes) unless I specified the build as well as the version when building a
ba62d93a9ef5 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
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39 conda environment, e.g.: texlive-core=20210325=h97429d4_0
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40 -->
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41 </requirements>
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42 <!-- I specified the versions above because it takes a VERY long time
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43 to search for package versions when they are not omitted; also,
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e986073cb2f2 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 423304b26e63d23cd8e5fb4c2fb729c5beea1254
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44 locking version numbers might lead to more-reproducible behavior.
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45 -->
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46 </xml>
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47 </macros>