Mercurial > repos > galaxyp > idpqonvert
annotate idpQonvertEmbedder.xml @ 17:8381e82a73ee draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 66973ea01088c809c3f7c3daa54233674c67fa45"
| author | galaxyp |
|---|---|
| date | Fri, 12 Jun 2020 21:00:55 +0000 |
| parents | d526b4107a42 |
| children |
| rev | line source |
|---|---|
|
0
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
1 <?xml version="1.0"?> |
|
17
8381e82a73ee
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 66973ea01088c809c3f7c3daa54233674c67fa45"
galaxyp
parents:
15
diff
changeset
|
2 <tool id="idpqonvertEmbedder" name="idpEmbedder" version="@VERSION@.1"> |
|
0
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
3 <description>Embed human/mouse gene metadata into IDPicker files</description> |
|
4
eab42d2eace6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 2a4b1c0e842f356239c141ea7cad867d91607c6a
galaxyp
parents:
3
diff
changeset
|
4 <macros> |
|
eab42d2eace6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 2a4b1c0e842f356239c141ea7cad867d91607c6a
galaxyp
parents:
3
diff
changeset
|
5 <import>macros.xml</import> |
|
14
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
6 <xml name="IsobaricQuantitationOptions" token_tolerance="0.015"> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
7 <param argument="-ReporterIonMzTolerance" type="float" min="0.000001" value="@TOLERANCE@" label="Tolerance window to search for iTRAQ/TMT reporter ions" help="The most intense ion in the tolerance window is used as the reporter ion intensity." /> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
8 <param name="ReporterIonMzTolerance_units" type="select" label="Tolerance units"> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
9 <option value="ppm">Parts per million</option> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
10 <option value="daltons" selected="true">Daltons</option> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
11 </param> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
12 <param argument="-NormalizeReporterIons" type="boolean" value="false" label="Normalize reporter ion channels to match 1:1 ratio?" help="This option will adjust the intensity of each channel so that the total intensity of each channel across an entire source file is the same." /> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
13 </xml> |
|
4
eab42d2eace6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 2a4b1c0e842f356239c141ea7cad867d91607c6a
galaxyp
parents:
3
diff
changeset
|
14 </macros> |
|
eab42d2eace6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 2a4b1c0e842f356239c141ea7cad867d91607c6a
galaxyp
parents:
3
diff
changeset
|
15 <expand macro="requirements" /> |
|
0
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
16 <stdio> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
17 <exit_code range="1:" level="fatal" description="Job Failed" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
18 <regex match="\nError:.*\n" source="both" level="fatal" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
19 </stdio> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
20 <command> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
21 <![CDATA[ |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
22 #set $input_name = $input.display_name |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
23 cp '$input' output && |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
24 ln -s output output.idpDB && |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
25 ln -s \$(dirname \$(which idpQonvert))/gene2protein.db3 gene2protein.db3 && |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
26 |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
27 #if $use_raw_data_condition.use_raw_data |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
28 #for $i in $use_raw_data_condition.input_raw |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
29 ln -s '${i.file_name}' '${i.display_name}' && |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
30 #end for |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
31 #end if |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
32 |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
33 idpQonvert |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
34 -EmbedOnly true |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
35 -EmbedGeneMetadata $EmbedGeneMetadata |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
36 #if $use_raw_data_condition.use_raw_data |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
37 -EmbedSpectrumScanTimes $use_raw_data_condition.EmbedSpectrumScanTimes |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
38 -EmbedSpectrumSources $use_raw_data_condition.EmbedSpectrumSources |
|
14
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
39 |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
40 #set $qm = $use_raw_data_condition.quantitation_method_condition.QuantitationMethod |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
41 -QuantitationMethod $qm |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
42 #if $qm != "None" and $qm != "LabelFree" |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
43 -ReporterIonMzTolerance '$use_raw_data_condition.quantitation_method_condition.ReporterIonMzTolerance $use_raw_data_condition.quantitation_method_condition.ReporterIonMzTolerance_units' |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
44 -NormalizeReporterIons $use_raw_data_condition.quantitation_method_condition.NormalizeReporterIons |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
45 #end if |
|
0
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
46 #end if |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
47 output.idpDB |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
48 ]]> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
49 </command> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
50 <inputs> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
51 <param name="input" type="data" format="idpdb" label="Input idpDB file" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
52 <param argument="-EmbedGeneMetadata" type="boolean" value="true" label="Embed Gene Metadata?" help="Allows gene-centric analysis in IDPicker. The gene metadata embedding only works for human/mouse proteins from a RefSeq database. For best results, run idpQonvert with RefSeq no matter what database was used for the search: idpQonvert always remap the peptides anyway. Non-human/mouse proteins and any unmappable human/mouse proteins will get gene ids like "Unmapped_<protein accession>". This option, run by itself, is very fast." /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
53 <conditional name="use_raw_data_condition"> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
54 <param name="use_raw_data" type="boolean" label="Do you have the raw data (spectra)?" help="More embed options are available if the raw spectra are available." /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
55 <when value="false"></when> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
56 <when value="true"> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
57 <param name="input_raw" type="data" format="mzml,mzxml,mgf,ms2,mz5" label="Input raw MS files" multiple="true" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
58 <param argument="-EmbedSpectrumSources" type="boolean" value="false" label="Embed Spectrum Sources?" help="Allows visualizing peptide-spectrum-matches without downloading the raw data. Embedding spectra will greatly increase the size of the database, even though only spectra that passed the import FDR filter will be included. This option can take a LONG time to run." /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
59 <param argument="-EmbedSpectrumScanTimes" type="boolean" value="false" label="Embed Spectrum Scan Times?" help="If the pepXML/mzIdentML file did not contain scan time (retention time) information, this will look up that information in the raw data. This option, run by itself, will take some time (it has to open every raw file)." /> |
|
14
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
60 <conditional name="quantitation_method_condition"> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
61 <param argument="-QuantitationMethod" type="select" label="Quantitation Method" help="Enables quantitation methods other than spectral counting. For isobaric isotope labelling quantitation (iTRAQ/TMT) or intensity-based label-free quantitation (XIC), select the appropriate QuantitationMethod here. You have to keep iTRAQ/TMT and label-free data separate since you can only specify a single QuantitationMethod for the entire assembly. Like embedding spectrum sources, this option can take a LONG time to run, although not quite as long."> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
62 <option value="None" selected="true">None</option> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
63 <option value="LabelFree">Label-free (XIC)</option> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
64 <option value="ITRAQ4plex">iTRAQ 4-plex</option> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
65 <option value="ITRAQ8plex">iTRAQ 8-plex</option> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
66 <option value="TMT2plex">TMT 2-plex</option> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
67 <option value="TMT6plex">TMT 6-plex</option> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
68 <option value="TMT10plex">TMT 10-plex</option> |
|
17
8381e82a73ee
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 66973ea01088c809c3f7c3daa54233674c67fa45"
galaxyp
parents:
15
diff
changeset
|
69 <option value="TMT11plex">TMT 11-plex</option> |
|
8381e82a73ee
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 66973ea01088c809c3f7c3daa54233674c67fa45"
galaxyp
parents:
15
diff
changeset
|
70 <option value="TMTpro16plex">TMTpro 16-plex</option> |
|
14
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
71 </param> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
72 <when value="ITRAQ4plex"><expand macro="IsobaricQuantitationOptions" /></when> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
73 <when value="ITRAQ8plex"><expand macro="IsobaricQuantitationOptions" /></when> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
74 <when value="TMT2plex"><expand macro="IsobaricQuantitationOptions" /></when> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
75 <when value="TMT6plex"><expand macro="IsobaricQuantitationOptions" /></when> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
76 <when value="TMT10plex"><expand macro="IsobaricQuantitationOptions" tolerance="0.003" /></when> |
|
17
8381e82a73ee
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 66973ea01088c809c3f7c3daa54233674c67fa45"
galaxyp
parents:
15
diff
changeset
|
77 <when value="TMT11plex"><expand macro="IsobaricQuantitationOptions" tolerance="0.003" /></when> |
|
8381e82a73ee
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 66973ea01088c809c3f7c3daa54233674c67fa45"
galaxyp
parents:
15
diff
changeset
|
78 <when value="TMTpro16plex"><expand macro="IsobaricQuantitationOptions" tolerance="0.003" /></when> |
|
14
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
79 |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
80 <when value="None"></when> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
81 <when value="LabelFree"></when> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
82 </conditional> |
|
0
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
83 </when> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
84 </conditional> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
85 </inputs> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
86 <outputs> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
87 <data format="idpdb" name="output" from_work_dir="output" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
88 </outputs> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
89 <tests> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
90 <test> |
|
9
43c73fd96ce0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot
galaxyp
parents:
4
diff
changeset
|
91 <param name="input" value="201208-378803.idpDB" /> |
|
0
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
92 <param name="EmbedGeneMetadata" value="false" /> |
|
9
43c73fd96ce0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot
galaxyp
parents:
4
diff
changeset
|
93 <output name="output" file="201208-378803.idpDB" compare="sim_size" delta="500000" /> |
|
0
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
94 </test> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
95 <test> |
|
9
43c73fd96ce0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot
galaxyp
parents:
4
diff
changeset
|
96 <param name="input" value="201208-378803.idpDB" /> |
|
0
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
97 <param name="EmbedGeneMetadata" value="true" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
98 <output name="output" file="201208-378803-embeddedGenes.idpDB" compare="sim_size" delta="500000" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
99 </test> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
100 <test> |
|
9
43c73fd96ce0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot
galaxyp
parents:
4
diff
changeset
|
101 <param name="input" value="201208-378803.idpDB" /> |
|
0
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
102 <param name="EmbedGeneMetadata" value="true" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
103 <param name="use_raw_data" value="true" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
104 <param name="input_raw" value="input/201208-378803.mzML" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
105 <param name="EmbedSpectrumSources" value="false" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
106 <param name="EmbedSpectrumScanTimes" value="true" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
107 <param name="QuantitationMethod" value="None" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
108 <output name="output" file="201208-378803-embeddedGenesAndScanTimes.idpDB" compare="sim_size" delta="500000" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
109 </test> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
110 <test> |
|
9
43c73fd96ce0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot
galaxyp
parents:
4
diff
changeset
|
111 <param name="input" value="201208-378803.idpDB" /> |
|
0
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
112 <param name="EmbedGeneMetadata" value="true" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
113 <param name="use_raw_data" value="true" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
114 <param name="input_raw" value="input/201208-378803.mzML" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
115 <param name="EmbedSpectrumSources" value="true" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
116 <param name="EmbedSpectrumScanTimes" value="false" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
117 <param name="QuantitationMethod" value="None" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
118 <output name="output" file="201208-378803-embeddedGenesAndSpectra.idpDB" compare="sim_size" delta="500000" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
119 </test> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
120 <test> |
|
9
43c73fd96ce0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot
galaxyp
parents:
4
diff
changeset
|
121 <param name="input" value="201208-378803.idpDB" /> |
|
0
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
122 <param name="EmbedGeneMetadata" value="true" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
123 <param name="use_raw_data" value="true" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
124 <param name="input_raw" value="input/201208-378803.mzML" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
125 <param name="EmbedSpectrumSources" value="false" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
126 <param name="EmbedSpectrumScanTimes" value="true" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
127 <param name="QuantitationMethod" value="ITRAQ4plex" /> |
|
14
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
128 <param name="ReporterIonMzTolerance" value="10" /> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
129 <param name="ReporterIonMzTolerance_units" value="ppm" /> |
|
04b90790b751
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 2d404b98b40ff043be71bea81c114ea3433c0751
galaxyp
parents:
9
diff
changeset
|
130 <param name="NormalizeReporterIons" value="true" /> |
|
0
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
131 <output name="output" file="201208-378803-embeddedGenesAndQuantitation.idpDB" compare="sim_size" delta="500000" /> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
132 </test> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
133 </tests> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
134 <help> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
135 <![CDATA[ |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
136 **What it does** |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
137 |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
138 Embeds optional data and metadata into the IDPicker 3 idpDB files. This should be run after all idpDB files have been merged together (e.g. after idpAssemble). |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
139 ]]> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
140 </help> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
141 <citations> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
142 <citation type="doi">10.1021/pr900360j</citation> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
143 <citation type="bibtex">@misc{toolsGalaxyP, author = {Chilton, J, Chambers MC, et al.}, title = {Galaxy Proteomics Tools}, publisher = {GitHub}, journal = {GitHub repository}, |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
144 year = {2015}, url = {https://github.com/galaxyproteomics/tools-galaxyp}}</citation> <!-- TODO: fix substitution of commit ", commit = {$sha1$}" --> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
145 </citations> |
|
2eecd0b031d0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/idpqonvert commit 3b8a4b0b93d2270f3a31fe67d7c09c73046ceb4c-dirty
galaxyp
parents:
diff
changeset
|
146 </tool> |