Mercurial > repos > galaxyp > fasta_merge_files_and_filter_unique_sequences
changeset 4:c94c2b84221e draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fasta_merge_files_and_filter_unique_sequences commit e1c8e2a34c95b413ff0a0e97c90593ceb75f8223
| author | galaxyp |
|---|---|
| date | Mon, 24 Jul 2017 18:24:37 -0400 |
| parents | 1c12ec822e1b |
| children | b73b80525568 |
| files | fasta_merge_files_and_filter_unique_sequences.xml |
| diffstat | 1 files changed, 9 insertions(+), 6 deletions(-) [+] |
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--- a/fasta_merge_files_and_filter_unique_sequences.xml Mon Jul 24 17:12:56 2017 -0400 +++ b/fasta_merge_files_and_filter_unique_sequences.xml Mon Jul 24 18:24:37 2017 -0400 @@ -8,13 +8,14 @@ '$output' $uniqueness_criterion '$accession_parser' #if $batchmode.processmode == 'merge': - #set $inputs = $batchmode.input_fastas + #for $input in $batchmode.input_fastas: + '$input' + #end for #else: - #set $inputs = [ $batchmode.input_fastas ] + #for $input in $batchmode.input_fastas: + '$input.input_fasta' + #end for #end if - #for $input in $inputs: - '$input' - #end for </command> <inputs> <conditional name="batchmode"> @@ -23,7 +24,9 @@ <option value="merge">Merge all FASTAs (always output a single FASTA)</option> </param> <when value="individual"> - <param name="input_fastas" type="data" format="fasta" label="FASTA file" /> + <repeat name="input_fastas" title="Input FASTA File(s)"> + <param name="input_fasta" format="fasta" type="data" label="FASTA File"/> + </repeat> </when> <when value="merge"> <param name="input_fastas" type="data" format="fasta" multiple="True" label="FASTA file" />