Mercurial > repos > galaxyp > blast_plus_remote_blastp

changeset 1:758e4a062992 draft

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planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/ncbi_blast_plus commit 8fd454dc8332fff689a831b57ba50919a55c8277
author galaxyp
date Thu, 27 Jul 2017 17:22:06 -0400
parents e3ee9f1693c3
children b1dc6ed2cc07
files blast_plus_remote_blastp.xml
diffstat 1 files changed, 1 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/blast_plus_remote_blastp.xml	Fri Jan 20 16:00:42 2017 -0500
+++ b/blast_plus_remote_blastp.xml	Thu Jul 27 17:22:06 2017 -0400
@@ -5,7 +5,6 @@
     <parallelism method="multi" split_inputs="query" split_mode="to_size" split_size="500" merge_outputs="output1" />
     -->
     <requirements>
-        <requirement type="binary">blastp</requirement>
         <requirement type="package" version="2.6.0">blast</requirement>
     </requirements>
     <stdio>
@@ -75,7 +74,7 @@
   #end if
 #end if
 #if $db_opts.db_opts_selector != "remote":
-  -num_threads 8
+  -num_threads "\${GALAXY_SLOTS:-4}"
 #end if
 #if $adv_opts.adv_opts_selector=="advanced":
   $adv_opts.filter_query